Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01328 ACCCTAGAACAAGCAAAGAGACAAAACCAACCTTGGATCTGCAAAGCCAAAGGCTCAAGTTCCATGGATTCAATTCAAGAATTTATGGACTCCTGTAACTCTCACATCACCACCACCACAACCGCTATCACCGCCACCACCAACAGCTTAGTCGGTACCTCCAATTCCCCCTCCGCTTCCCCCAACACCAGCAGCCGCTACGAGAACCAAAAGCGCCGTGACTGGAACACCTTTGGTCAGTACCTCAAGAATCACCGACCCCCTCTCTCCCTCTCCCGGTGCAGCGGTGCACACGTCCTTGAATTTCTCAGGTACTTGGACCAATTTGGCAAGACGAAAGTGCACACTCCGATCTGTCCATTTTACGGGCACCCAAACCCTCCAGCACCATGTCCATGTCCTCTAAGACAAGCCTGGGGAAGCCTTGATGCCCTCATAGGTCGTCTGAGGGCAGCTTATGAGGAAAACGGAGGGAAGCCTGAAATCAACCCATTTGGAGCAAGAGCTGTGAGACTCTACCTCCGGGAGGTTCGTGAACTTCAGTCCAAAGCAAGAGGCATAAGCTATGAGAAGAAGAAACGAAAGCGTCCACCACCACCACCACTTCCACAACCACAACAACAACAATCATTGACTCTTCCTCATCACCACCACCATCACCACCACCACCTCCCTCCCTCAGGTGCAACTCAATAA 696 0.5187 TLEQAKRQNQPWICKAKGSSSMDSIQEFMDSCNSHITTTTTAITATTNSLVGTSNSPSASPNTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGKPEINPFGARAVRLYLREVRELQSKARGISYEKKKRKRPPPPPLPQPQQQQSLTLPHHHHHHHHHLPPSGATQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01328 231 MobiDBLite consensus disorder prediction 48 66 - -
Vimu3g01328 231 ProSiteProfiles ALOG domain profile. 66 193 IPR006936 -
Vimu3g01328 231 MobiDBLite consensus disorder prediction 48 70 - -
Vimu3g01328 231 PANTHER PROTEIN G1-LIKE2 47 215 IPR040222 -
Vimu3g01328 231 MobiDBLite consensus disorder prediction 184 231 - -
Vimu3g01328 231 Pfam ALOG domain 56 179 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01328 Vimu-Chr3 24005365 24006247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01328 - - gmx:100803605 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01328 3 24005365 24006247 Vimu6g02708 6 23654656 23655588 PCT