Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02405 ATGAATTCCTTTCAAGAATTTGACTCTTCGTCAAACTCGGACGCCAAAGCCATCAACCTCTCAGCAGGTAACACCTCCAATTTCACATCACCACCACCACCTTCATCTTCCTCATCACCACCTTCGTCCTCCCCCACTACTCTGAGCCGCTACGAGAACCAAAAGCGACGCGACTGGAACACGTTCGGGCAGTACCTTCGGAACCACAGACCCCCACTTTCACTCTCACGCTGCAGCGGCGCACACGTGCTGGAATTCCTGAGGTACCTCGACCAGTTCGGAAAAACAAAGGTTCACACCCACCTTTGTCCCTTCTTCGGGCACCCCAACCCTCCTGCACCTTGTCCTTGCCCTCTACGCCAAGCATGGGGCAGCCTTGATGCTCTGATAGGTCGTCTCAGAGCTGCTTTCGAAGAAAATGGAGGAAAACCTGAAACTAACCCTTTTGGTGCTCGCGCCGTGAGACTTTACCTTCGTGAAGTGCGTGATTCACAAGCCAAGGCTAGGGGAATTAGCTACGAGAAAAAGAAACGCAAGCGTCCTCAACATCCTCCTCCATTGCCTCCTCCAAATAATGCAAGTTAG 585 0.5231 MNSFQEFDSSSNSDAKAINLSAGNTSNFTSPPPPSSSSSPPSSSPTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQHPPPLPPPNNAS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02405 194 ProSiteProfiles ALOG domain profile. 50 177 IPR006936 -
Vimu3g02405 194 PANTHER PROTEIN G1-LIKE2 31 182 IPR040222 -
Vimu3g02405 194 MobiDBLite consensus disorder prediction 164 194 - -
Vimu3g02405 194 Pfam ALOG domain 41 163 IPR006936 -
Vimu3g02405 194 MobiDBLite consensus disorder prediction 1 54 - -
Vimu3g02405 194 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02405 Vimu-Chr3 38594665 38596522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02405 - - gmx:100789834 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02405 3 38594665 38596522 Vimu3g02405 3 38594665 38596522 ECH
Vimu6g02708 6 23654656 23655588 Vimu3g02405 3 38594665 38596522 ECH
Vimu3g02405 3 38594665 38596522 Vimu6g02708 6 23654656 23655588 ECH