Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00103 ATGAGCTCATTTCAGGAATTTGAATCCTCTCCAAGCAAAGACATGATTAACACAGGTCTCAACAACACTATCACAAACCTAACCCCTTCCTTGAACTTCTCCTCAGCATCATCTTCTTCCACAATATCAGCAACAACAACATCTTCATCACCACCTTCCACCCCAAGCCGCTATGAGAACCAAAAGCGAAGAGACTGGAACACTTTCGGGCAGTACCTCAGAAACCACAGGCCCCCACTTTCCCTCTCTCGCTGCAGTGGTGCTCATGTTCTTGAGTTCCTCAGATACCTCGACCAGTTCGGTAAAACCAAGGTTCACACACATCTTTGTCCCTTCTTTGGGCATCCAAACCCTCCTGCACCGTGTCCCTGCCCTCTGCGCCAAGCATGGGGAAGCCTTGATGCCCTCATAGGGCGTCTCAGAGCAGCGTTTGAAGAGAACGGTGGAAAGCCTGAAGCCAACCCTTTTGGTGCTCGTGCTGTAAGACTCTACCTTCGTGAAGTTCGTGACTCTCAGGCCAAAGCTAGAGGCATCAGCTACGAGAAAAAAAAGCGCAAGCGTCCTCCTCAACCACCTTCTTCAAATGCTACCACTCAGTAG 600 0.5 MSSFQEFESSPSKDMINTGLNNTITNLTPSLNFSSASSSSTISATTTSSSPPSTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPSSNATTQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00103 199 MobiDBLite consensus disorder prediction 171 188 - -
Vimu3g00103 199 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g00103 199 MobiDBLite consensus disorder prediction 171 199 - -
Vimu3g00103 199 PANTHER PROTEIN G1-LIKE2 40 192 IPR040222 -
Vimu3g00103 199 MobiDBLite consensus disorder prediction 33 62 - -
Vimu3g00103 199 MobiDBLite consensus disorder prediction 33 57 - -
Vimu3g00103 199 ProSiteProfiles ALOG domain profile. 57 184 IPR006936 -
Vimu3g00103 199 Pfam ALOG domain 48 170 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00103 Vimu-Chr3 795663 796262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00103 - - qsa:O6P43_003203 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02708 6 23654656 23655588 Vimu3g00103 3 795663 796262 PCT