Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01937 ATGTTGGGATTTCAAAACAAATGGAATGATATTTGTCAGCGTCTTCATCACAAAGGCTCACTGCCTCACTTTGATATTTCTCAGACAAGGCCTCAAGCTCCAATACTTGAGACTTTACGGTTTGGTCCAGGTTTTAAGGAAAGCAGCAGTAAAGATCCATCACGCACTGAATTCCCATATTCTACTACTCAAATGTCTTACATGCCCAAAGGGTTGCATATTACTTTTCCATTACCTTCTGATACAGTCAGTGTTCATACTGTAACTGGTAGTGATTCAAAAGTCTCAGAGGCACTGCAAATTGATGCCAAGACCCCTAGGGTTGTCCCTTCGAGTGTGCTTGACCACAGATCATCTTTATCCCATACACCTGTGACCACAGATTTAGGATTGGGAACGTTATATACATCAACATCTCAGAATCCAGATACCCCAAAACTACAAGATCAGAGAAAGCATGTTCAGCAATTGTCAGACTCTATTTCAACTGATTGTGATGCTATTAATGAAACTACCTCACACCAAATTCCTAGATCTTCTTGGTCTGGTTCAAATTTTGATGGGAAATTTGATTTAGCAGATTTCAAGTCTCTTAATCGAGTTCTTGCTGAATCGGTTGGCTGGCAGGATGAAGCCATCCGTGCTATCAGTCAAACTTTGTCCCTTGGTAAATTTGGTTCAGGAAAGAGTAGAGGTTCACAAGGTAGAGCAGACACATGGTTGGCTTTCCTTGGACCAGATAGACTTGGCAAACGAAAAATTGCTTCAGTTCTTGCAGAGACTATTTTTGGAAACTCTGAAAGCCTAATCTCTGTGGATCTGGGCTTCCAGGATAGCTTTTCCCCATTGAACTCTGTTTTTGAATGCCAAAAATCACGTTGTTATGATGTGCTCAGGAGGAAGACAATTGTGGACTATATTGCTGGAGAGTTGAGTAAAAAACCCCATTCCGTTGTCTTTCTTGAAAACGTAGATAAAGCTGATTTTCTGGTGCAGACTAGTTTGTTGCAGGCAGTAAGAGCTGGCAAATTTCCAGATTCTCATGGAAGGGCAATTAGCATCAATAACACAATCTTTCTTGTAGCCTCAACTAAAGATAGTAGTTCTTTGGTTTCAGATGAGTCTAAGATGTTTTCAGAGGAAAGAATCCTTGAAGCCAAAAGATGTCAAATGCAATTACTACTAGGACATGCTTCCGAGGATGCCAAAACAATTGGTAGAACAAATGTCAAGGTTGTAGCAAGTAAAGGTTTTTCCAAATCATCATCTCTGAACAAAAGAAAGCAGACTGATACTAGTGACTCCAAGAAGGGAACAGCAAGCAAGATGCAGAGACAGGACAGTGAGTCATCTCGATCCTATCTGGATCTAAACATGCCTGTAGAGGAGAGTGATGAGGGTGTGAATGACAATGACCAAGAAAGTGAATCCATAACAGAAAACACAGACACCTGGTTAAGTGACTTCTTTGATCAAATTGATGAGAAAGTGGTGTTTAAGCCATTCAACTTTGATGAGCTTGCTGAGCAAGTGTTGAAAAACATTGGCCTACTATTTCAAAGGACATTCGGATCAGAGCTTCGGTTGGAAATTGATTATGAGGTAATGACACACATACTTGCAGCTGCTTGGTTATCAGACAAAAAAAATGCAGTGGAGAATTGGGTTGAACATGTTCTTGGCAGATGCTTTGTGGAAGCACAGAAGAAATACCATCATCCTGTGTCTCAATATGTTGTGAGACTGGTTAACTGTGAATCCAATTTTGTGGAAGAGCAAGCTCCTGGTGTATGCCTTCCAGCTAGAATTAACCTGGACTAA 1821 0.4069 MLGFQNKWNDICQRLHHKGSLPHFDISQTRPQAPILETLRFGPGFKESSSKDPSRTEFPYSTTQMSYMPKGLHITFPLPSDTVSVHTVTGSDSKVSEALQIDAKTPRVVPSSVLDHRSSLSHTPVTTDLGLGTLYTSTSQNPDTPKLQDQRKHVQQLSDSISTDCDAINETTSHQIPRSSWSGSNFDGKFDLADFKSLNRVLAESVGWQDEAIRAISQTLSLGKFGSGKSRGSQGRADTWLAFLGPDRLGKRKIASVLAETIFGNSESLISVDLGFQDSFSPLNSVFECQKSRCYDVLRRKTIVDYIAGELSKKPHSVVFLENVDKADFLVQTSLLQAVRAGKFPDSHGRAISINNTIFLVASTKDSSSLVSDESKMFSEERILEAKRCQMQLLLGHASEDAKTIGRTNVKVVASKGFSKSSSLNKRKQTDTSDSKKGTASKMQRQDSESSRSYLDLNMPVEESDEGVNDNDQESESITENTDTWLSDFFDQIDEKVVFKPFNFDELAEQVLKNIGLLFQRTFGSELRLEIDYEVMTHILAAAWLSDKKNAVENWVEHVLGRCFVEAQKKYHHPVSQYVVRLVNCESNFVEEQAPGVCLPARINLD 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01937 606 MobiDBLite consensus disorder prediction 421 479 - -
Vian7g01937 606 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 5 572 - -
Vian7g01937 606 MobiDBLite consensus disorder prediction 131 153 - -
Vian7g01937 606 Pfam AAA domain (Cdc48 subfamily) 242 379 IPR003959 GO:0005524|GO:0016887
Vian7g01937 606 MobiDBLite consensus disorder prediction 427 443 - -
Vian7g01937 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 543 IPR027417 -
Vian7g01937 606 MobiDBLite consensus disorder prediction 463 477 - -
Vian7g01937 606 MobiDBLite consensus disorder prediction 131 145 - -
Vian7g01937 606 Gene3D - 171 501 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01937 Vian-Chr7 31106017 31107837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01937 - - vun:114193089 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01937 7 31106017 31107837 Vian7g01937 7 31106017 31107837 ECH
Vian7g01937 7 31106017 31107837 Vian2g03010 2 50787712 50792712 ECH
Vian6g00617 6 22676071 22681240 Vian7g01937 7 31106017 31107837 ECH
Vian2g03010 2 50787712 50792712 Vian7g01937 7 31106017 31107837 ECH
Vian3g02633 3 40904810 40908916 Vian7g01937 7 31106017 31107837 ECH
Vian6g00617 6 22676071 22681240 Vian7g01937 7 31106017 31107837 PCT