Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04688 ATGTCATCTGCTGGTGTTACTACTCTTAGTCCAGTGGATCCCACTGAACCATTGTTGCCTCCAAATGCATCCCATTTTCCATCTCACTTGCCTTTTGAGGACAAATCCATTTTCATATTTCTGTCGTTTTCGGGTTCGTTGACTCCTATCCGTGTCATGGAATGGGATACTATTGAGTCTGTCAAATTCAAAATCCAAAGGTCTGAGTGTCTTCCGTTTTTAACTAACAAGCAGAAGTTGGTTTATGCTGGTCGTGAACTTGCCCGAAGTGATTCTTTACTCAAGGACTATGGAGTAACCGATGGAAATGTTTTACATTTGATAATCAAACTATCAGATCTTCAGGTTATCAATGTGAAAACATCTTCTGGAAAGGAATTCTCTTTTCAGGTTGAACGAGGTAGGGATGTCAAGTACATCAAGCGACGGATTTCTAAAAAGGAGAAACAATTTGATGATCCCGAGGAGCAGGAACTTGTGTGTAATGGGGAACGGCTGGAAGATCAGAAGCTTATTGATGATATCTGTTGCAAGCATAATGATGCAGTGGTGCATATGTTTGTTAGAAAAAAGCATGCAAAAGTTCATAGAAGACCCCTTGAGTTGTCAATTGTAGCAACAGACTTGGCTGATAAGAAGACTAAAGATGTTTGTGGTAGAAAACTTGAAGTTGGCGGTGAAGAAGATACTGATGCCATTCAGATGGTGGTACCGAGAAAACTTCCTGATAGTGATTTTCTTTTGGAGCCAATTATAATTAACCCTAAAATTGAGTTAGCTTCAGTGATTCAGAATATGGTAAACTCTACATATGATGGACTAGCTAATGAAAAATATCCCATAGGTTCTGCAGAAGGTACAGGGGGAGCTTACTTTATGCCTGATTCAACTGGTCAGAAGTATGTGTCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTCGAGGTCTTCCATTATCACTAAGTGGTGAAGgcttaaaaaagggtacaagaGTTGGTCAAGGTGCATTCAGGGAAGTTGCGGCTTATGTTTTGGATCATCCAATAAGTGGACGCCGCCAATTATTTGGTGATGTGAAGGGTTTTGCTGGTGTTCCTCCAACATTGATGGTCAAGTGTTTGCATAAGGGATTTAACCATCCAGGAGATTTGATTCCTAAGATTGGATCCATGCAGATGTTTGTGAAAAATAATGGGAGCTGTGAAGATATCGGTGCTGGGGCTTTCCCGGTAAAAGAAGTACACAAAATTAGTGTTCTCGACATAAGATTGGCAAATGCTGATAGGCATGCTGGGAATATTTTGATCAGCACAGAGAAGGAGGATGACCAGTCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCACAAGCCCGGAAGCCATATTCTCCGGAAACTATTGAGTACATAAAGTCACTGgatgctgaagaagatattgcCCTTTTGAAGTTTCATGGATGGGATCTGCCAATTGAATGTGCCCGGACTCTTAGAATCTCAACCATGCTTTTGAAGAAAGGGGTTGAGAGAGGATTGACCCCTTTTGCAATTGGAAACTTGATGTGCAGGGAATCATTGAACAAGGAATCTGTGATAGAGGAAATAGTTGAAGAAGCATTTGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTGATGGATGCTGTTTCTCAAATCATGGACCAGCGTCTTGATAAGATTTTCAACTCTCCTTTTTAA 1776 0.3998 MSSAGVTTLSPVDPTEPLLPPNASHFPSHLPFEDKSIFIFLSFSGSLTPIRVMEWDTIESVKFKIQRSECLPFLTNKQKLVYAGRELARSDSLLKDYGVTDGNVLHLIIKLSDLQVINVKTSSGKEFSFQVERGRDVKYIKRRISKKEKQFDDPEEQELVCNGERLEDQKLIDDICCKHNDAVVHMFVRKKHAKVHRRPLELSIVATDLADKKTKDVCGRKLEVGGEEDTDAIQMVVPRKLPDSDFLLEPIIINPKIELASVIQNMVNSTYDGLANEKYPIGSAEGTGGAYFMPDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLSGEGLKKGTRVGQGAFREVAAYVLDHPISGRRQLFGDVKGFAGVPPTLMVKCLHKGFNHPGDLIPKIGSMQMFVKNNGSCEDIGAGAFPVKEVHKISVLDIRLANADRHAGNILISTEKEDDQSVLIPIDHGYCLPTSFEDCTFEWLYWPQARKPYSPETIEYIKSLDAEEDIALLKFHGWDLPIECARTLRISTMLLKKGVERGLTPFAIGNLMCRESLNKESVIEEIVEEAFDSVLPGTSEATLMDAVSQIMDQRLDKIFNSPF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04688 591 Gene3D - 116 201 - -
Tsu07g04688 591 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 587 - -
Tsu07g04688 591 SUPERFAMILY Protein kinase-like (PK-like) 389 587 IPR011009 -
Tsu07g04688 591 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 277 570 IPR000403 -
Tsu07g04688 591 SMART ubq_7 37 110 IPR000626 GO:0005515
Tsu07g04688 591 SMART ubq_7 115 189 IPR000626 GO:0005515
Tsu07g04688 591 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g04688 591 CDD Ubl_ubiquitin_like 117 187 - -
Tsu07g04688 591 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 587 IPR044571 -
Tsu07g04688 591 SUPERFAMILY Ubiquitin-like 108 192 IPR029071 -
Tsu07g04688 591 Gene3D - 37 110 - -
Tsu07g04688 591 ProSiteProfiles Ubiquitin domain profile. 56 110 IPR000626 GO:0005515
Tsu07g04688 591 Pfam Phosphatidylinositol 3- and 4-kinase 286 535 IPR000403 -
Tsu07g04688 591 Pfam Ubiquitin family 117 190 IPR000626 GO:0005515
Tsu07g04688 591 Pfam Ubiquitin family 39 111 IPR000626 GO:0005515
Tsu07g04688 591 ProSiteProfiles Ubiquitin domain profile. 117 174 IPR000626 GO:0005515
Tsu07g04688 591 SUPERFAMILY Ubiquitin-like 26 111 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04688 Tsu-Chr7 51336582 51339797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04688 34 585 Acyl Lipid Metabolism Gene Families AT5G24240 55.456 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04688 - - gmx:100791631 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04688 07 51336582 51339797 Tsu07g04688 07 51336582 51339797 ECH
Tsu08g00919 08 10086474 10090128 Tsu07g04688 07 51336582 51339797 ECH
Tsu05g00200 05 1453814 1461000 Tsu07g04688 07 51336582 51339797 ECH
Tsu02g00359 02 3022497 3024889 Tsu07g04688 07 51336582 51339797 ECH
Tsu07g04688 07 51336582 51339797 Tsu08g00919 08 10086474 10090128 PCT