Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00359 ATGTCGGTTGCTTTGAGTTCAATTTGCAAAGAGAGGGTTTATTGGGAAGGTCAAACAGAACATTGTTCTGTTGACCCTATTCTGATTTACCTGACAGTTGATAGTGTTGTTACGCCGGTGCGCGTTTTGGAGTCTGATTCAATTGCTTCTGTCAAATTAAGGATTCAACAATGTAAAGGTTTTGTCGTGAAGAATCAGAAGCTTGTTTTTAGTGGCAGAGAGCTTGCTCGTAATGATACACTTATTAAGGAGTATGGCGTCACGGATGGTAATGTTCTTCATTTGGTTTTACGCCTTTCGGATATTCTTTTCATTGTTGTTAGGACAGTTTCTGGTAAGGAATTTGAGTTTCATATTGATAGGCATAGAAATGTGGGGTATCTTAAACAAAGGATTAGGAAAAAAGGGGAAGGTTTTATTGATCTTGAGGAACAAGAGCTTTTTTGCAATGATGAGATGCTTGATGATCAAATACTTTTTCATGATATATGTAAAGGGGATGATGATGTAGTTCATTTGATTATTAAGAAATCGGTTAAGGTTAGAACTACACCTATTCACAATGATTTGAAGATTTCTCTTGAGGCTTCTATACCGGATGAGAGAATTGATCAGCGACTGTTACAAGTAGAAGATAATAAGAATAGGATCAAACCGATTATAGGAAAGTTACCACCTGGTGTCAGTTTCTGGTTGGAACCTATTGTTGTGAATCCCAAGATCAATTTTTTGCCTTCCCTTTGGGACATGATCAACTCCACATATGAGGGTTTGAAGAAAGGACATCGTCCTATTAGATCCTCGGAAGGAACAGGAGGGACTTATTTTATGCAAGATTCAACTGGTCAGGAGCATGTTTCAGTTTTCAAGCCCTTGGATGAGGAACCAATGGCTGTGAACAACCCAAGAGgcctaccaagttcaacaaaCGGTGAAGGTTTAAAAAGAGGAACAAGGGTGGGAGAAGGAGCTTTGAGGGAGGTTGCAGCTTATGTATTAGATCATCCAAGGAGTGGGCCGCGTCTGGTGACAGGTGAAGAGATCGGGTTTTCCGGTGTTCCTCCTACTGTCATGGTGCAGTGCTTACACCAAGAGTTTCACCACCCAAATGGTTATGCTTGCTCATCAAAACATGTCAAGATTGGATCATTACAGAAGTTCATGAATAATGACGGTAATTGTGAGGACATTGGACCCGGGGCATTTCCAGTGGAGGAGGTGCATAAGATAACCGTGCTTGATATAAGAATGGCTAATGCAGACAGACATGCTGGGAATATTTTGATTAGAAAGGAGGCAGGTGGCCAAATTAAGCTCATTCCCATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAACACGTCAGCCTTACTCACGTGAGACAGTTGATTACATCAATTCTTTGGATGCTGAAAGAGACATTGAACTTTTGAAACTTTATGGATGGGATATTCCACTTCAGTGTGCGCGAACACTTCGCATTTCCACAATGCTGCTGAAGAAAGGGGTTGCAAGAGGTCTTACTCCGTATGCAATTGGAAGCATCGTGTGTCGGGAAAATTTGAACAAGGAATCTGTAATTGAGGAAATTATAAGTGAAGCACAGGATTCCCTGGGTCCTGGCATGGACGAATCAGCGTTTCTTGATTCCATCTCCCAAATCATGGATTCCCATCTTGATAAGCTTGCAATATag 1731 0.4055 MSVALSSICKERVYWEGQTEHCSVDPILIYLTVDSVVTPVRVLESDSIASVKLRIQQCKGFVVKNQKLVFSGRELARNDTLIKEYGVTDGNVLHLVLRLSDILFIVVRTVSGKEFEFHIDRHRNVGYLKQRIRKKGEGFIDLEEQELFCNDEMLDDQILFHDICKGDDDVVHLIIKKSVKVRTTPIHNDLKISLEASIPDERIDQRLLQVEDNKNRIKPIIGKLPPGVSFWLEPIVVNPKINFLPSLWDMINSTYEGLKKGHRPIRSSEGTGGTYFMQDSTGQEHVSVFKPLDEEPMAVNNPRGLPSSTNGEGLKRGTRVGEGALREVAAYVLDHPRSGPRLVTGEEIGFSGVPPTVMVQCLHQEFHHPNGYACSSKHVKIGSLQKFMNNDGNCEDIGPGAFPVEEVHKITVLDIRMANADRHAGNILIRKEAGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQTRQPYSRETVDYINSLDAERDIELLKLYGWDIPLQCARTLRISTMLLKKGVARGLTPYAIGSIVCRENLNKESVIEEIISEAQDSLGPGMDESAFLDSISQIMDSHLDKLAI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00359 576 Pfam Phosphatidylinositol 3- and 4-kinase 270 523 IPR000403 -
Tsu02g00359 576 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 575 - -
Tsu02g00359 576 SUPERFAMILY Protein kinase-like (PK-like) 417 574 IPR011009 -
Tsu02g00359 576 ProSiteProfiles Ubiquitin domain profile. 103 177 IPR000626 GO:0005515
Tsu02g00359 576 SMART ubq_7 103 176 IPR000626 GO:0005515
Tsu02g00359 576 SMART ubq_7 27 98 IPR000626 GO:0005515
Tsu02g00359 576 SUPERFAMILY Ubiquitin-like 99 177 IPR029071 -
Tsu02g00359 576 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Tsu02g00359 576 SUPERFAMILY Ubiquitin-like 35 100 IPR029071 -
Tsu02g00359 576 Gene3D - 26 102 - -
Tsu02g00359 576 CDD Ubl_ubiquitin_like 105 174 - -
Tsu02g00359 576 Gene3D - 104 191 - -
Tsu02g00359 576 Pfam Ubiquitin family 35 99 IPR000626 GO:0005515
Tsu02g00359 576 Pfam Ubiquitin family 105 177 IPR000626 GO:0005515
Tsu02g00359 576 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 575 IPR044571 -
Tsu02g00359 576 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 261 558 IPR000403 -
Tsu02g00359 576 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00359 Tsu-Chr2 3022497 3024889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00359 2 575 Acyl Lipid Metabolism Gene Families AT5G24240 55.709 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00359 - - gmx:100809172 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00359 02 3022497 3024889 Tsu02g00359 02 3022497 3024889 ECH
Tsu02g00359 02 3022497 3024889 Tsu08g00919 08 10086474 10090128 ECH
Tsu02g00359 02 3022497 3024889 Tsu07g04688 07 51336582 51339797 ECH
Tsu05g00200 05 1453814 1461000 Tsu02g00359 02 3022497 3024889 PCT