Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03752 ATGTCTACCTCTTCCATAAACGGTTTTAGTCTTTCTTCTTTGTCCCATGCCAAAACTTCTATCAAGAAAACTACATTGAGACCTGTTTTTGCATCTCTtaactcttcttcttcctcctcttcatcttctaatTTCCCTTCTCTTATTCAAGACAAACCTGTTTTTGCTTCCTCTTCTCCTATCATCACCCCAATTTTGaGAGAAGAAATGGGAAAGGGTTATGAAGAAGCCATTCAAGAACTCGAAAAGTTGTTGAGgGAGAAGACTGATTTGAAAGCCACAGCAGCTGAAAAAGTTGAACAAATAACATCTCAACTTGGAAATGTAACAGCTCAAGctgcatcatcatcatctgaaGGCATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTCATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGtaCATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGTGAAGCTTTTGTGGTTAGAAATGTTGCTAACTTGGTTCCACCTTATGACCAGGCCAAATATGCTGGAACTGGAGCTGCTATTGAGTATGCAGTTCTGCATCTCAAGgTTTCCAACATTGTGGTTATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTGTCTTTCCCATTTGATGGACCCTACTCTACTGATTTCATTGAGGAGTGGGTCAAAATTGGTTTACCTGCAAAGGCCAAGGTGAAATCAAAGCATGGAGATGCACCTTTTGGAGAGCTATGCACACATTGTGAGAAGGAAGCTGTGAATGCTTCACTTGGAAACCTTCTAACCTATCCATTTGTGAGAGAGGGTTTGGTGAATGGAACATTGGCACTAAAAGGAGGATACTATGACTTTGTGAAAGGATCTTTTGAGCTTTGGGGACTTGAATTTGGTCTTTCATCCACTTTCTCCGTATGA 1005 0.396 MSTSSINGFSLSSLSHAKTSIKKTTLRPVFASLNSSSSSSSSSNFPSLIQDKPVFASSSPIITPILREEMGKGYEEAIQELEKLLREKTDLKATAAEKVEQITSQLGNVTAQAASSSSEGIPTSEASERIKTGFIHFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGPYSTDFIEEWVKIGLPAKAKVKSKHGDAPFGELCTHCEKEAVNASLGNLLTYPFVREGLVNGTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03752 334 SUPERFAMILY beta-carbonic anhydrase, cab 127 329 IPR036874 GO:0004089|GO:0008270
Tsu06g03752 334 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 209 229 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu06g03752 334 SMART Pro_CA_2 153 323 IPR001765 GO:0004089|GO:0008270
Tsu06g03752 334 Coils Coil 67 101 - -
Tsu06g03752 334 PANTHER CARBONIC ANHYDRASE 1 334 IPR001765 GO:0004089|GO:0008270
Tsu06g03752 334 Pfam Carbonic anhydrase 160 318 IPR001765 GO:0004089|GO:0008270
Tsu06g03752 334 Gene3D Carbonic anhydrase 114 334 IPR036874 GO:0004089|GO:0008270
Tsu06g03752 334 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 165 172 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu06g03752 334 CDD beta_CA_cladeB 133 322 IPR045066 GO:0004089|GO:0008270
Tsu06g03752 334 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03752 Tsu-Chr6 49767267 49773296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03752 K01673 - gmx:100500448 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03752 06 49767267 49773296 Tsu03g02226 03 24264598 24266249 ECH
Tsu06g03752 06 49767267 49773296 Tsu06g03752 06 49767267 49773296 ECH
Tsu05g01470 05 13977079 13989201 Tsu06g03752 06 49767267 49773296 ECH
Tsu04g02842 04 34092927 34093989 Tsu06g03752 06 49767267 49773296 ECH