Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02842 ATGAAATTGACTGACATCCCTACCGAGCACTGCCTTCACAATCCTCACTGCGCACGTGACTTCATAGAGCAATGGGTTCAAATTTGTAATCCAGCGAAGTCCAAAGTTAAAGAAGAAGCAAGCAAATTAGATTTCTCTCAGCAGTGTACCAACTTGGAGAAGGCAACTGTTAATGTATCTCTTGGGAACTTGCTGACTTATCCATTTGTGAGAGATGCAGTTGTGAAGAAAACCATAGCTTTGAAAGGTGCACATTACGATTTTGTTAAGGGAGCATTTGAGCTATGGGATATAGACTTCAAAATTTCACCCTCAGTGACCTTTTAA 327 0.4067 MKLTDIPTEHCLHNPHCARDFIEQWVQICNPAKSKVKEEASKLDFSQQCTNLEKATVNVSLGNLLTYPFVRDAVVKKTIALKGAHYDFVKGAFELWDIDFKISPSVTF 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02842 108 PANTHER CARBONIC ANHYDRASE 17 108 - -
Tsu04g02842 108 Pfam Carbonic anhydrase 18 92 IPR001765 GO:0004089|GO:0008270
Tsu04g02842 108 Gene3D Carbonic anhydrase 7 108 IPR036874 GO:0004089|GO:0008270
Tsu04g02842 108 PANTHER CARBONIC ANHYDRASE 17 108 IPR001765 GO:0004089|GO:0008270
Tsu04g02842 108 SUPERFAMILY beta-carbonic anhydrase, cab 12 103 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02842 Tsu-Chr4 34092927 34093989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02842 K01673 - qsu:112028684 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02842 04 34092927 34093989 Tsu04g02842 04 34092927 34093989 ECH
Tsu04g02842 04 34092927 34093989 Tsu03g02227 03 24270245 24271917 ECH
Tsu04g02842 04 34092927 34093989 Tsu06g03752 06 49767267 49773296 ECH