Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02226 ATGGCAATTCAATCATCTGAGCAAGCCATTGAACAACTGAAGAATCTTCTCAGAGAGAAGGAGGAACTTAATGAAGTAGTCACAACAAAAATTGAGGAGCTTATAGTTGAATTGAAGGGATTTCATCCACATCCAAATAACACTGCTGAACAGAGAATCATTGATGGTTTTACTTACTTCAAGCTCAACAATTTCGACAAGAACCCGGAATTGTATGAACAACTTGCTAAGGGACCCTCCTCCAAGTTGATGGTATTTTCTTGCTCCGACCCTAGAGCGAGTCCAGATATTATCTTGAACTTTCAACTTGGTGAAACTTTCGTGATCCGAAACATTGCTAATATGATCCCTGCATTTAATCAGCTAAGATACAGTGGAGTTGGTGCAACAATTGAGTTTGCTATTGAAGTTCTAAAGGTTGAGAACATTTTGGTTATTGGACATAGTGGCTGCGGCGGAATACAGAGGCTTATGACTCATCCTGAGGATGGTTCTATTCCATTTGACTTCATAGATGATTGGGTGAAAATTGGTTTACCTGCCAAAATCAAGGTCAAGAAAGAATATGAAGACTATGATTTCAAAGAACAATGCAAATTATGTCAAGTGgaatCGGTGAATAACTCATTGCTGAACCTAAATACATATCCATGTGTTGATAGAGAAATAAGGAACAAGAATGTAGCACTATTGGGGGGTTACTTTGATCTTGTGAATGGAGAATTCAAGCTTTGGAAGTATAACACTGTTGTTACTAAACCCATTACCATACCCCTCAAAACCAATGACTTGACTATATAA 801 0.3783 MAIQSSEQAIEQLKNLLREKEELNEVVTTKIEELIVELKGFHPHPNNTAEQRIIDGFTYFKLNNFDKNPELYEQLAKGPSSKLMVFSCSDPRASPDIILNFQLGETFVIRNIANMIPAFNQLRYSGVGATIEFAIEVLKVENILVIGHSGCGGIQRLMTHPEDGSIPFDFIDDWVKIGLPAKIKVKKEYEDYDFKEQCKLCQVESVNNSLLNLNTYPCVDREIRNKNVALLGGYFDLVNGEFKLWKYNTVVTKPITIPLKTNDLTI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02226 266 Coils Coil 3 37 - -
Tsu03g02226 266 SUPERFAMILY beta-carbonic anhydrase, cab 51 249 IPR036874 GO:0004089|GO:0008270
Tsu03g02226 266 Gene3D Carbonic anhydrase 42 257 IPR036874 GO:0004089|GO:0008270
Tsu03g02226 266 SMART Pro_CA_2 76 246 IPR001765 GO:0004089|GO:0008270
Tsu03g02226 266 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 132 152 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tsu03g02226 266 PANTHER CARBONIC ANHYDRASE 3 257 - -
Tsu03g02226 266 PANTHER CARBONIC ANHYDRASE 3 257 IPR001765 GO:0004089|GO:0008270
Tsu03g02226 266 Pfam Carbonic anhydrase 84 241 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02226 Tsu-Chr3 24264598 24266249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02226 K01673 - gmx:547671 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03752 06 49767267 49773296 Tsu03g02226 03 24264598 24266249 ECH
Tsu03g02226 03 24264598 24266249 Tsu03g02226 03 24264598 24266249 ECH