Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01151 ATGGTTATGCAGAAGAGGTTGGATTATGGCTTTAATGGCTATCAAGTTCCTTCCGTTCCTAGAGCTTCAAGATCTCCTAGGGGGAGGGGAACAGTCAGAAAGAAACCCGAGAGCAATCAGATACAGGCGTTTGATATTTTGGCTAGTGTAGCTGGCAATCTTTTGCAGAAGAATCAGAGTTCTATTCTTGATAATGCTTCTTCTGCGAAAGATCCTCGCACTTTTTCTGGTATTAACATAAAGGAAAACAAACAAGAGAATCAACTAGGGTCGCTTAAGGAGGAGCAATTTGAGCCTGGAACATGCAGTGAAGTTGTCTCTGGTTGTGTCCCTAGTTTGCAAGAGAAACATGAAAACCAAAGAGTCACGAGTGATTCATCGCTTCATGGCAATCATCTTGAAGGACAAGGACAGAATGAACTTGAAAGGGATGATGAACGTGTGAAATTGCGAAGTCCAAATGAGAAAATCATTCGTATTAAAAATAGTTCAGATGGATCAATAGAACAAGGCCAAAAAGCATCAAAAGATTGCAGTGCTGAAAATCATGTTGAGAAGCCTTCACCGGAGGGCCACTGCCGCAGGAATCTTGATTCTTTACCGAATGGTTTCGGTTCTAGGAAATTAGTTAATAGAGATGATGACGAAAACTTTGTTCAGTGCACTCAACTGAACTCAAAGAATAAGATATCTTCTGATCCACCACAAGATACGTTAAAGGTTAAGGATGCAAGTCCTTTTGTGAAGGATGAAAACAATAGCGGGGACAACTCGGTGCTTGAAAATTCAGAAAGGATGTATCCATTTAAGAAAAGGAAGTTTTACTACCAAACTTCGTCATCTACGTCTGATAGCTGGTCTCACTGTCAAGGCACAGTTGATTCTTCTTATACAAGGGTTAATGGCACAAACCATGGTGCTGGTGCAGGTGCAACAATGCATGTCATCGAAGAATCATCTTCTATAGCCGACGAACAAGTTCATTCTGGTTCCAAGGGTTGTAATGtgaagcttagCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATACCTGAAACTGCTACTATTGGTTCACTGAAGAGGACAGTAATGGAAGCTGTGACAGCTATACTTGGAGACGAACTACATGTTGGCATCCTTCTTCAGGGAAAGAAGGTTCGAGATGACAGCAAAACTCTAATCCAGACTGGAATATCTCAAGATGACAAACATCATAGGTTAGGATTCATGTTGGAGCCAAGACATAATCGAATTTCAACCTCGTACAATGAAGACCCTTGTTTCCTAACCACCAATTCCCGACAAAAGCTGTCTAGGTAa 1326 0.4065 MVMQKRLDYGFNGYQVPSVPRASRSPRGRGTVRKKPESNQIQAFDILASVAGNLLQKNQSSILDNASSAKDPRTFSGINIKENKQENQLGSLKEEQFEPGTCSEVVSGCVPSLQEKHENQRVTSDSSLHGNHLEGQGQNELERDDERVKLRSPNEKIIRIKNSSDGSIEQGQKASKDCSAENHVEKPSPEGHCRRNLDSLPNGFGSRKLVNRDDDENFVQCTQLNSKNKISSDPPQDTLKVKDASPFVKDENNSGDNSVLENSERMYPFKKRKFYYQTSSSTSDSWSHCQGTVDSSYTRVNGTNHGAGAGATMHVIEESSSIADEQVHSGSKGCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKHHRLGFMLEPRHNRISTSYNEDPCFLTTNSRQKLSR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01151 441 MobiDBLite consensus disorder prediction 176 193 - -
Tsu04g01151 441 MobiDBLite consensus disorder prediction 161 175 - -
Tsu04g01151 441 SUPERFAMILY Ubiquitin-like 331 413 IPR029071 -
Tsu04g01151 441 MobiDBLite consensus disorder prediction 116 147 - -
Tsu04g01151 441 MobiDBLite consensus disorder prediction 161 211 - -
Tsu04g01151 441 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 441 - -
Tsu04g01151 441 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 441 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01151 Tsu-Chr4 11414006 11420663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01151 - - gmx:100807254 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01151 04 11414006 11420663 Tsu03g00585 03 5063601 5068436 ECH
Tsu04g01151 04 11414006 11420663 Tsu05g03217 05 43371908 43376676 ECH
Tsu04g01151 04 11414006 11420663 Tsu04g01151 04 11414006 11420663 ECH
Tsu04g01151 04 11414006 11420663 Tsu02g05206 02 61026932 61032368 ECH