Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05206 ATGGTGGCGCAGAACCAGATAAATTACGGATTTAATGGCTATCAGGTGCCAAAAAAGCCTCGTGCCGCACGATCACCTAGGAAGAGGGATACATTTCAAAGAAGCGTGGAAAACGATCGAATGTGTGCGATTGACTTATTGGCCACCGTAGCTGCCGGCACTTTATTGCAAGAGAAACAGAATCCAATCACACCTTGTGACGGATCTTCGAAAAAAGATCAGCACGGATTCattaaagaagaagatgaagatgcaaATACACCATTCAAAGCCGAGCTTCCTAATGAAGCAACTTGTGACAAAAGGCTTCAACATGGATTTTTTACGGAAGTGTGCGCAGATGCAAATAAGCCATTGAAAGCTGAGCTTTCTGATGATGGAAGtagtgaaaaaaaatgtttctctACTCTTTCTTCACAGGTGTACGATCGAAATTGCTGTTTGAAGGAAAATAATCTGCATCCTGAAATTGATGGTCAATCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAATTAGTTACTGATGTTATGGTGGATAGAATAAGCCATagtgaaatgaaaaatattactaGTAAAGTTGAATTAGGATCTTCTGGATATCCAGATTGTAATAATTGCAACTTAGATGTTGATGTAAGTATAGTAAAGGATGAGGTCCAAAATTCCGAGAAGGTACCAATCGGTACTTCGGCTGGAATGTGCTGTTTTGAGGATCCCGTGGATGAAAAGCCTCCGTTGCCGGTCAATTTAAGTGGCAATGCCAAGTTGTCTGGGTATGAAGATAGCACACCCCATAGCTCGTTGTTCAAAGGTTGCGACAATGTAACAGTAGTTGGTAGAGATGATGACGAAAACTTTTCAGGGTGTTCTAACCCTAGTTCAAAAACAAAGACCTTTAGGTCAAAGACTTGTATAGGTGATCAAAGAATAAGGAAAAGATTGGCTTCTAAATATCGGAAAGTTGCTCGAGAATCAAAGCACGATACACTTTCTAACAATGTAGTGGATAGAAATTTCAACACCGTTTACAGCAATAGGAAGAACAGTTATAAACGGCAATTATCTCAAATGAATATTCCTTTCAAGAAGAGGAAGATTTTTGACTGCAGCTCCACTTCAAATTCTAATGGATATATCAGAAATGACAACACTTATTATTCAACCAAGAATGACATGAATCAAGGCGTTTCTTGTTCATCTGCTCGAATGCGCAAAGATCCGGGAATGTCTTCCTTGGAAGGATACCATCGGTCAGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCGGAGCTTTTTATCGAGCTTCCAGAAACTGCAACGGTTGCATCGTTAAAGAGAGCAGTGATGGAGGCAGTGACTACTCTACTTCGAGGTGGATTGCGTGTTGGCATGATTCTCAACGGAAAGAAACTTAGAGACGACAGTAAAACTTTACTTCAGACAGGAATTTCTCATGATAACGCGCTGGATGCTTTGGGCTTCACCTTGGAGCCTAATTCTTCTCAAAGCTTACCAATCACATGTGCTAAAGATTCTCTTCATGTTCCGAGTGCGGACATGCCTCTATCTTTAATAGGgCAACCTTCCAGTCCAGCTGTAGTTCGTCCGATTCAGAGGATTCAAGGTTTCTGTGACACTGAGCATCAAGTAACCAGTTTAAGTAACATTGTTGAAAGTGAGCACGATTCAGCACCTTCTCCTATCAGTACAATAGGTGAAAAAAGATTGACAGATTCAAAAGAACTTGTTACTATTCCTGAAATGGATACGGAGGGATTAGCTGTGGTACCAGTGAACCAGAAGCCAAAGCGAACTGAGATGTCACAACGCCGCCGAATTCGTAGGCCTTTTTCTGTTGCCGAAGTTGAAGCACTTGTTGAAGCAGTTGAAAGACTTGGAACTGGAAGGTGGCGTGATGTTAAACTTCGTGCTTTTGATGATGCAAAGCATAGGACATATGTGGATTTGAAGGATAAATGGAAAACCTTGGTACACACGGCAAGAATATCTCCTCAACAAAGAAGAGGAGAGCCTGTACCCCAAGAACTTTTGGATAGGGTCCTTACTGCTCATGCATATTGGTCCCAACATCAACAAACTAAGCAACAACAACTCAAACATCACCCTGAAACTTGCCTTCTACTTTAA 2184 0.402 MVAQNQINYGFNGYQVPKKPRAARSPRKRDTFQRSVENDRMCAIDLLATVAAGTLLQEKQNPITPCDGSSKKDQHGFIKEEDEDANTPFKAELPNEATCDKRLQHGFFTEVCADANKPLKAELSDDGSSEKKCFSTLSSQVYDRNCCLKENNLHPEIDGQSCIASIVTSSSCSEKLVTDVMVDRISHSEMKNITSKVELGSSGYPDCNNCNLDVDVSIVKDEVQNSEKVPIGTSAGMCCFEDPVDEKPPLPVNLSGNAKLSGYEDSTPHSSLFKGCDNVTVVGRDDDENFSGCSNPSSKTKTFRSKTCIGDQRIRKRLASKYRKVARESKHDTLSNNVVDRNFNTVYSNRKNSYKRQLSQMNIPFKKRKIFDCSSTSNSNGYIRNDNTYYSTKNDMNQGVSCSSARMRKDPGMSSLEGYHRSALRSRDSHVKLRIKSFRVPELFIELPETATVASLKRAVMEAVTTLLRGGLRVGMILNGKKLRDDSKTLLQTGISHDNALDALGFTLEPNSSQSLPITCAKDSLHVPSADMPLSLIGQPSSPAVVRPIQRIQGFCDTEHQVTSLSNIVESEHDSAPSPISTIGEKRLTDSKELVTIPEMDTEGLAVVPVNQKPKRTEMSQRRRIRRPFSVAEVEALVEAVERLGTGRWRDVKLRAFDDAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQHQQTKQQQLKHHPETCLLL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05206 727 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 727 IPR031105 -
Tsu02g05206 727 Gene3D - 615 718 - -
Tsu02g05206 727 CDD SANT_TRF 627 677 - -
Tsu02g05206 727 SUPERFAMILY Homeodomain-like 627 708 IPR009057 -
Tsu02g05206 727 ProSiteProfiles Myb-like domain profile. 621 676 IPR001005 -
Tsu02g05206 727 ProSiteProfiles Ubiquitin domain profile. 431 501 IPR000626 GO:0005515
Tsu02g05206 727 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 621 680 IPR017930 -
Tsu02g05206 727 SMART sant 625 678 IPR001005 -
Tsu02g05206 727 MobiDBLite consensus disorder prediction 1 33 - -
Tsu02g05206 727 SUPERFAMILY Ubiquitin-like 426 515 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05206 Tsu-Chr2 61026932 61032368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05206 - - gsj:114374220 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05206 02 61026932 61032368 Tsu02g05206 02 61026932 61032368 ECH
Tsu02g05206 02 61026932 61032368 Tsu03g00585 03 5063601 5068436 ECH
Tsu02g05206 02 61026932 61032368 Tsu05g03217 05 43371908 43376676 ECH
Tsu04g01151 04 11414006 11420663 Tsu02g05206 02 61026932 61032368 ECH