Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05038 ATGTATAAGTCAGAGAATACGCAAAGAGAAGGAAGAGTTCTCAATTTTCATCATATTGATACTGAGAATCCTTCCTTCTCTTCCACGCTTCTCGACAAGATTTATCGTTCCATCGACGAAGGAGACACAAAAGGTTGTTCCGATATGAAGTTCTACACAGAAACAACTATCAACAGACACAGCAAAACCACTGTTAGATTCAACAGAGTCCTTCAAGAAGAACCAAATCTTCGCCTAAATGTTGGAAGAACACAAAGGACAAAACAAATAGACAGAAAATCACATCATGATGAGGATGTTCTGTTTTTTAGTTCTGGTTCAAGTTCTTCAGATTCAAGTTCTGGTCTATTATCATCATCTTCAGAAACAGAATCAATGTACAGAGCAAAATCACGAGGTTCGTGTTTCGCTCCTTCGAGGCCTAAGCCGGTGAAAACAACCGTTCATCCAGAGAGAATCATTTCAAACGATGAAGATATGTTGATCAAATCAAAATCAAGAGCATTGAAGATTTACAACAATCTCAAAAAAGTGAAACAACCAATCTCACCAGGTGGAAAACTCACAAGTTTTCTCAACTCTCTGTTCATAAACACAAAGAAAACAAAAACTGTTCCCTCTTATGAAGACACAAATGCAGATAGAAAAGCTAAATCAGGACTAGCTTCAACTTGTTCTTCAGCATCTTCGTTTTCGCGTTCTTGTTTGAGTAAAAATTCATCTACATCAAGAGACAAATTGCACAATGGTGTTAAAAGAACGGTGCGATTTTATCCGGTGAGTGTGATTGTTGATGAAGATAATCGACCTTGTGGTCATAAATGTTTGTATGGAGGAGTTAGTAAGAAGAAGGAAGAAGAAGAGAAGGTTTTGGAAACGAGCAAAAGAGTGGAAGAAGTTGCTAGAGAATTTATAAGAGAGCATCATCTTAATAAGAAGATTTTTAGGGATTTTTCTATGAGGAAGAATGAAGATGTTGTTGTTGATGATGATGATGTTGCAAGTTGTTCAAGTTCAGATCTTTTTGAACTTGATCATTTATCTGTGATGGGAAATGATAATAGGTATTGTGAAGATTTGCCTGTGTTTGAAACTACTCATGTTAGTACTAATCGTGCTATTCGCATAATGTAA 1134 0.3633 MYKSENTQREGRVLNFHHIDTENPSFSSTLLDKIYRSIDEGDTKGCSDMKFYTETTINRHSKTTVRFNRVLQEEPNLRLNVGRTQRTKQIDRKSHHDEDVLFFSSGSSSSDSSSGLLSSSSETESMYRAKSRGSCFAPSRPKPVKTTVHPERIISNDEDMLIKSKSRALKIYNNLKKVKQPISPGGKLTSFLNSLFINTKKTKTVPSYEDTNADRKAKSGLASTCSSASSFSRSCLSKNSSTSRDKLHNGVKRTVRFYPVSVIVDEDNRPCGHKCLYGGVSKKKEEEEKVLETSKRVEEVAREFIREHHLNKKIFRDFSMRKNEDVVVDDDDVASCSSSDLFELDHLSVMGNDNRYCEDLPVFETTHVSTNRAIRIM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05038 377 Coils Coil 283 303 - -
Trre5g05038 377 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 16 374 IPR039621 GO:0009734
Trre5g05038 377 MobiDBLite consensus disorder prediction 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05038 Trre-Chr5 51857357 51858490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g05038 - - cave:132184517 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05038 5 51857357 51858490 Trre5g05038 5 51857357 51858490 ECH
Trre5g05038 5 51857357 51858490 Trre15g00692 15 5151923 5153161 ECH
Trre5g05038 5 51857357 51858490 Trre1g00551 1 4162145 4163239 ECH
Trre15g05148 15 61119894 61120964 Trre5g05038 5 51857357 51858490 ECH
Trre15g00692 15 5151923 5153161 Trre5g05038 5 51857357 51858490 ECH