Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g05148 ATGCATAGCAGAGAAAGAACTTTCCCACAAAGGAGAAGAACTCCTTCTTTCTCCTCAATTCTTCTCGACACCATCGATCATTCTATCGATCAATCGAAAACCGATTTTATTGACGATGTTAACCAACATCAACATCACTATCTCTATAATCAAACCACCAAACATGTCAAATTCAATGAAAAAATTGTCAATTCCAAACAGAGGATGAATCTTCGTCAAGCTGTGATGATTGAAGATTGGATGGAGAAGAATTCAAGTTCAAGTTCATCAGAATGTAGCTCTGGTGGAATCTTTTCATCCTCAGAAACAGATTCATCTTACAAAAAACAAAGATCAAGACCCCAGAAACATATGAACCTAAATTCAGAGAAACAACAAAAGCAGAACAAGAACAAGAAAAAGGAGAAGCAACAAGGTTGGGAAGATGGTTTTACAAGAACAAAGTTGAGAGCTTTGAAAATCTATGATGAACTGAATCAAAAAGTGAAGCAACCCATTTCACCTGGGAGTCGAATAGCTACATTTCTTAGCTCCATTTTCAATTATCACAATGTGAAAAAAGCTAAAATGTGTTACGTTGGTGCTGTTGAAGATGTTAGTTTTGATCGCAAATCTAAATCACCTTCCGTTTCTTCATTTTCTAGAAGATCTTGCATGAGCAAAACACCATCAAAATCAAACAATGGTGTTAAAAGATCAGTGAGATTTTACCCTGTCAGTGTAATCCTAGGTGAGGATGATTCTGAACAACAACAACGACGACAACAACAACTACCTAGTATTCTTCGAAATGTTACAAGAAATTCTTCGGTTAAGGAGCTGAAAAAAATTAACAATGTTATTAATATGGCTAAAGAAAAAGGAGCTATTAGAAGGTTTTACGATAACGGTGAAGATGAGGATGAGGATGAGGATGAAGATGAAGATGATGATGCTTTGAGTTATTCGAGTTCGGATTTGTTTGAACTTGATCATCTGATTGGAGGAGAAAGGTATCAACAAGAGCTTCCAGTTTATGAAACAACCAATTTAGAAACGAATAAGGCCATTGCTAATGGTTTGTGTTTGTAG 1071 0.3585 MHSRERTFPQRRRTPSFSSILLDTIDHSIDQSKTDFIDDVNQHQHHYLYNQTTKHVKFNEKIVNSKQRMNLRQAVMIEDWMEKNSSSSSSECSSGGIFSSSETDSSYKKQRSRPQKHMNLNSEKQQKQNKNKKKEKQQGWEDGFTRTKLRALKIYDELNQKVKQPISPGSRIATFLSSIFNYHNVKKAKMCYVGAVEDVSFDRKSKSPSVSSFSRRSCMSKTPSKSNNGVKRSVRFYPVSVILGEDDSEQQQRRQQQLPSILRNVTRNSSVKELKKINNVINMAKEKGAIRRFYDNGEDEDEDEDEDEDDDALSYSSSDLFELDHLIGGERYQQELPVYETTNLETNKAIANGLCL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g05148 356 Coils Coil 117 137 - -
Trre15g05148 356 MobiDBLite consensus disorder prediction 85 142 - -
Trre15g05148 356 MobiDBLite consensus disorder prediction 85 105 - -
Trre15g05148 356 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 3 355 IPR039621 GO:0009734
Trre15g05148 356 MobiDBLite consensus disorder prediction 204 230 - -
Trre15g05148 356 MobiDBLite consensus disorder prediction 126 142 - -
Trre15g05148 356 MobiDBLite consensus disorder prediction 205 230 - -
Trre15g05148 356 MobiDBLite consensus disorder prediction 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g05148 Trre-Chr15 61119894 61120964 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g05148 - - mtr:25494190 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05148 15 61119894 61120964 Trre15g00692 15 5151923 5153161 ECH
Trre15g05148 15 61119894 61120964 Trre5g05038 5 51857357 51858490 ECH
Trre15g05148 15 61119894 61120964 Trre1g00551 1 4162145 4163239 ECH
Trre15g05148 15 61119894 61120964 Trre15g05148 15 61119894 61120964 ECH