Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00692 ATGGAGAAATGGAATAAACCTTCAAGAGATCATAGAAAACATCATCAAAGAGAAAACCCATCTTTCTCTTCATCTCTTTTAGATGTAATTTATCGATCGATCGACGAAGGACATCATAAAACAGAGGAAAAAGAAGAGAAACTCATGTTTTACAAAGAAATATCAACATCAACAACTACAACAACTATGAGGAAGATGAAGAGTGTTGAAGATGAAAAATCAAACTTTAGAAAAACAAGAAAGGTTGAGAATTGGAATGAGAAAGTTGTGAATGGTAGAAACTCTTTGACAGAATTTGAAAGAGTAACAAGAAACAATTCTAACACACTTTCCATGCATTCAAGTTCATCTTCTTCAGAATCAAGTTCAGCTGGTGGATTTTCATCATCTGATTCAGAATCATTTTATGGTTTACAAAAACCAAAACCAATTAGAACAAGTGTTTCTGAAAAACCAAACATTGGTTATAGCAGAAACCATAACCATAACCATAGCTATAACTATAACTATAACCATTCTGTTCAAAATCAAAATCCCAAAAATGAGAATGGTTTTGGTAAAACAAAGTCTAAAGCTTTGAGAATTTTGTATGGTGATATGAAGAAATCAAAGCAACCCATTTCACCTGGTGCTAGACTTGCAAGTTTTTTGAATTCACTTTTCACTTCTAGTGGAAATACAAAAAAATCAAAGGTATCATCATCAGCTACAAAAACTACTACAAACTCTGTTTTGGAAGCAAAATCAGCACAAGCTTCAACATGTTCATCGGTTTCTTCTTTTTCAAGGTCTTGTTTAAGCAAAACACCTTCATCAAGATCAGGTGCTAAAAGATCAGTGAGGTTTTGTCCTGTTAGTGTTATTGTTGATGAAGATTGTAGACCTTGTGGACACAAGAATTTGCATGAAGGTGAAAAGGGTTTGGTAGCTAATTCAATATATGATGGAAAAAGTAGTAGTGAGGAACTGAGGTTGCATGTGATGCAAGAAAGTAGAAGAGTTGAAGAATTAGCTAGAGATTTGTTGAAGAATTATCAGAAAAAAAATGAAGTTGATTTTAATATGCAATTTGAAGATGAAGATGATGATGATGATGGAGCTAGTTGTTCTAGTTCTGATTTATTTGAATTGGATAATTTATCAGTAATTGGGATTGAGAGGTATAGAGAAGAATTGCCTGTGTATGAAACTACTCATTTCAATCCTAATAGGGTTATGAGCAATGGTTTCATTATGTAA 1239 0.3277 MEKWNKPSRDHRKHHQRENPSFSSSLLDVIYRSIDEGHHKTEEKEEKLMFYKEISTSTTTTTMRKMKSVEDEKSNFRKTRKVENWNEKVVNGRNSLTEFERVTRNNSNTLSMHSSSSSSESSSAGGFSSSDSESFYGLQKPKPIRTSVSEKPNIGYSRNHNHNHSYNYNYNHSVQNQNPKNENGFGKTKSKALRILYGDMKKSKQPISPGARLASFLNSLFTSSGNTKKSKVSSSATKTTTNSVLEAKSAQASTCSSVSSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNLHEGEKGLVANSIYDGKSSSEELRLHVMQESRRVEELARDLLKNYQKKNEVDFNMQFEDEDDDDDGASCSSSDLFELDNLSVIGIERYREELPVYETTHFNPNRVMSNGFIM 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00692 412 MobiDBLite consensus disorder prediction 96 136 - -
Trre15g00692 412 MobiDBLite consensus disorder prediction 1 26 - -
Trre15g00692 412 MobiDBLite consensus disorder prediction 150 185 - -
Trre15g00692 412 MobiDBLite consensus disorder prediction 96 186 - -
Trre15g00692 412 MobiDBLite consensus disorder prediction 224 246 - -
Trre15g00692 412 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 412 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00692 Trre-Chr15 5151923 5153161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00692 - - gmx:100801760 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g05148 15 61119894 61120964 Trre15g00692 15 5151923 5153161 ECH
Trre5g05038 5 51857357 51858490 Trre15g00692 15 5151923 5153161 ECH
Trre15g00692 15 5151923 5153161 Trre15g00692 15 5151923 5153161 ECH
Trre15g00692 15 5151923 5153161 Trre5g05038 5 51857357 51858490 ECH
Trre15g00692 15 5151923 5153161 Trre1g00551 1 4162145 4163239 ECH