Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00551 ATGTATAAGATGGAGAAAGCATCTTCGAAACATGACAGATTCTTAAACCCTTCCTTCTCTTCCACACTCTTAGACCAAATTTACCGTTCCATGGACGACGACGGCCAACGAAAATCAACCACTGAAACAACCAAATTCTTCAGAGAACAAAAACCAACAACGGTTATCAACAAACTACCAACCGACAGAAAACACAACAACAACAAACCAAAAACTGAAAAAACCGTTTCTGTCGTGAAAACTGATAACAGAAGATCAAATCAACATGATCATGACCAAGATGCTCTGTTCTTCAGTTCAACTTCAATATCCTCCGATTCTAGCTCCGGTGGATTCTCCTCCTCTGACACAGATTCATTATACGGAACAAAGTCACGTGCTTCGTCGTGCTTTATTCCACCGAGGCCAAAACCGGTGAAAACAAGCGTGTCATTTAGATTTGAAAATGAGAAGGAGAAACAGGGGAATCGCGTTTTGGACGGGTTTTTTCCAAGTTCAGATACCAAACAAGGCACAAAAAATCTCAGCGAGGAAGTGATTTTAATAAAGAACAAATCTAGAGCGGTTAAGATTTACAACAACTTGAAGAAAGTAAAGCAACCGATTTCGCCAGGTGGAAAACTCACAAGTTTTCTTCATTCTCTTTTTAATAATAATGAGAAGAAAACAAAGACCGAGGAACCGAAGAAGCAGCAGAGAAACACGTGGGAGACTCGGGATAGAAAAGTAACTTCCACGTGTTCATCTGCTTCTTCGTTTTCTCGGTCTTGTTTGAGCAAGACCGCTTCATTTTGTCACCGAGACAGTGATAAAATGGCCCGACTTAGTGGTGTGGAAGAGCGTAGGGCTAAGGTGGAGGAAGCTACTAGAAAGTTTTTGAATGAGTATCGTTGTTATAACTACAAGAAGACGAATGATTTGGTTTTGTTAAAGGATTTGTGTGTTAATCTGAATGAAGAAGAAGAAGAAGAAGATGATGTGGCAAGTTGTGCTAGTTCTGATCTTTTTGAGTTGGATCATTTGGGTGTGTTGGGAGATGATAGGTATTGTGAGGAGCTTCCTGTGTTTGGGACTACTCGTGTTACTGTTAATTAA 1095 0.4027 MYKMEKASSKHDRFLNPSFSSTLLDQIYRSMDDDGQRKSTTETTKFFREQKPTTVINKLPTDRKHNNNKPKTEKTVSVVKTDNRRSNQHDHDQDALFFSSTSISSDSSSGGFSSSDTDSLYGTKSRASSCFIPPRPKPVKTSVSFRFENEKEKQGNRVLDGFFPSSDTKQGTKNLSEEVILIKNKSRAVKIYNNLKKVKQPISPGGKLTSFLHSLFNNNEKKTKTEEPKKQQRNTWETRDRKVTSTCSSASSFSRSCLSKTASFCHRDSDKMARLSGVEERRAKVEEATRKFLNEYRCYNYKKTNDLVLLKDLCVNLNEEEEEEDDVASCASSDLFELDHLGVLGDDRYCEELPVFGTTRVTVN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00551 364 MobiDBLite consensus disorder prediction 30 95 - -
Trre1g00551 364 MobiDBLite consensus disorder prediction 30 45 - -
Trre1g00551 364 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 7 363 IPR039621 GO:0009734
Trre1g00551 364 MobiDBLite consensus disorder prediction 46 61 - -
Trre1g00551 364 MobiDBLite consensus disorder prediction 123 143 - -
Trre1g00551 364 MobiDBLite consensus disorder prediction 62 92 - -
Trre1g00551 364 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00551 Trre-Chr1 4162145 4163239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00551 - - mtr:25481988 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00551 1 4162145 4163239 Trre1g00551 1 4162145 4163239 ECH
Trre5g05038 5 51857357 51858490 Trre1g00551 1 4162145 4163239 ECH
Trre15g05148 15 61119894 61120964 Trre1g00551 1 4162145 4163239 ECH
Trre15g00692 15 5151923 5153161 Trre1g00551 1 4162145 4163239 ECH