Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr7g4854 | ATGGCAAATACTATAGTGGTTTTTGATTTCGACAAAACCATTGTCGAATGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCAATGGTTTGTTCAATGAACTATTTCCCACTATGCCATGGAACAATCTCATGGATAGGATGATGATGGAGCTTCATTCTCATGGAAAAACCATTGAAGATATTGTGCAAGTTTTGAAGAGGATTCCTATAAACCCTAGAATAATCCCTTCCATTAAAGCAGCATATGCTTTAGGGTGTGATTTGAGGGTTGTAAGTGATGCAAACAATCTTTTCATTGATACAATTCTTGAGCATTTTGGAATTAGGGAATGTTTCTCTGAGATTAACACTAATCCAGGATATGTTGATGAGGAAGGAAGGTTGAGAATTTTGCCTTACCATGATCTCAATAAGCCTCCTCACAAATGTAATTTGTGCCCTGCAAACATGTGCAAGGGTCTAATCATAAATAGAATCCAAGACTCTCTATCATGTGAGGAGAATAAAAGATTTATCTATCTTGGTGATGGTAGTGGAGATTATTGTCCAAGCTTAAGGCTTAAAGAAAAAGATTTTGTGATGCCAAGGAAGAATTTTCCTGTGTGGGACTTAATTTGCAAAGATCCTTCACTTGTTAAAGCTAAAATTTATGAATGGAGTGATGGTGAAGAACAAGAAAGGGTTTTGCATCAATTAATCAACAAAATTTCATTGGAAGAAAATGTTCAATGCATTTCAACTGAATTTAAGATGCAGATTCCATCATTCAAGGCTCATGAGGCTTTACCTAAAGCTCTATCTATTAAGATATAA | 819 | 0.3553 | MANTIVVFDFDKTIVECDSDNWVVDELGFNGLFNELFPTMPWNNLMDRMMMELHSHGKTIEDIVQVLKRIPINPRIIPSIKAAYALGCDLRVVSDANNLFIDTILEHFGIRECFSEINTNPGYVDEEGRLRILPYHDLNKPPHKCNLCPANMCKGLIINRIQDSLSCEENKRFIYLGDGSGDYCPSLRLKEKDFVMPRKNFPVWDLICKDPSLVKAKIYEWSDGEEQERVLHQLINKISLEENVQCISTEFKMQIPSFKAHEALPKALSIKI* | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr7g4854 | 272 | SUPERFAMILY | HAD-like | 4 | 196 | IPR036412 | - | |
| Tpr7g4854 | 272 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 270 | - | - | |
| Tpr7g4854 | 272 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 239 | IPR016965 | GO:0016791 | |
| Tpr7g4854 | 272 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 6 | 187 | - | - | |
| Tpr7g4854 | 272 | Pfam | Putative Phosphatase | 5 | 235 | IPR016965 | GO:0016791 | |
| Tpr7g4854 | 272 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 270 | IPR016965 | GO:0016791 | |
| Tpr7g4854 | 272 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 4 | 199 | IPR006384 | GO:0016791 | |
| Tpr7g4854 | 272 | Gene3D | - | 1 | 190 | IPR023214 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr7g4854 | Tpr-Chr7 | 56519453 | 56521706 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr7g4854 | K13248 | - | gmx:100785878 | 421.394 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tpr5g2427 | 5 | 45901359 | 45903304 | Tpr7g4854 | 7 | 56519453 | 56521706 | ECH | |
| Tpr3g0487 | 3 | 4950245 | 4953952 | Tpr7g4854 | 7 | 56519453 | 56521706 | ECH | |
| Tpr7g4854 | 7 | 56519453 | 56521706 | Tpr7g4854 | 7 | 56519453 | 56521706 | ECH | |
| Tpr7g4854 | 7 | 56519453 | 56521706 | Tpr5g2426 | 5 | 45899796 | 45908374 | PCT |