Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0487 ATGGTGAAAGTGGTGGTGGTTTTGGACTTTGATCGGACCATAATCGACGACGACAGTGACAGATGGGTCATCAACGAATTGGGTCTCACCGACTTTTTCAACCAAATCCGCTCCACCATCCCATCATGGACATCTCTCATGGACACCATCATGAATGAGCTTCACTCCAAAGGAATCACCACAGATAACATCGCACAATGCCTTCAACGTGCTTTCTTGCATCCTAACATCGCTTCCGCCATCAAATCTGCACAATCTCTTGGGTGTGATTTAAGGATAATCAGTGATGCTAATATGTTCTATATTAAGACTATTCTTGAACATCATAATCTTTTAGGATGTTTTTCAGAAATCAATACAAACCCATCATTTGTTGATGAAAAGGGTTGCCTTCATGTCACTCCATTTCATGATTCAACATTGCCTCCTCATGGTTGTCAACTCTGCCCTCCAAATATGTGCAAGGGTTTGATAATAGACCGAATCCGAGGTTCTTTACCTGAAAGTGAAGCAAGATTCATCTACGTTGGAGATGGAGCAGGTGATTATTGCCCTACTTTGAAGCTCAAGGGAGGTGATTTTGTGATGCCTAGGAAGAATTATCCCTTATGGGACAGGATTGGCACTGACCCAAAACTAGTTCATGCAACAGTTCATGATTGGAGCAATGGGGAAGAGTTGGAGAACATACTACTCAACCTTGTCAAAAAATTAGTCACATAG 723 0.4205 MVKVVVVLDFDRTIIDDDSDRWVINELGLTDFFNQIRSTIPSWTSLMDTIMNELHSKGITTDNIAQCLQRAFLHPNIASAIKSAQSLGCDLRIISDANMFYIKTILEHHNLLGCFSEINTNPSFVDEKGCLHVTPFHDSTLPPHGCQLCPPNMCKGLIIDRIRGSLPESEARFIYVGDGAGDYCPTLKLKGGDFVMPRKNYPLWDRIGTDPKLVHATVHDWSNGEELENILLNLVKKLVT* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0487 240 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Tpr3g0487 240 PANTHER PHOSPHATASE, ORPHAN 1, 2 3 238 IPR016965 GO:0016791
Tpr3g0487 240 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 199 IPR006384 GO:0016791
Tpr3g0487 240 SUPERFAMILY HAD-like 4 185 IPR036412 -
Tpr3g0487 240 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Tpr3g0487 240 Gene3D - 1 192 IPR023214 -
Tpr3g0487 240 PANTHER THIAMINE PHOSPHATE PHOSPHATASE-LIKE PROTEIN 3 238 - -
Tpr3g0487 240 Pfam Putative Phosphatase 5 235 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0487 Tpr-Chr3 4950245 4953952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0487 K13248 - gmx:100306472 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0487 3 4950245 4953952 Tpr5g2427 5 45901359 45903304 ECH
Tpr3g0487 3 4950245 4953952 Tpr7g4854 7 56519453 56521706 ECH
Tpr3g0487 3 4950245 4953952 Tpr3g0487 3 4950245 4953952 ECH