Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2427 ATGTCTAACATTGTTATTGTTTTCGACTTTGACAAAACCATCATTGATTGTGACAGTGATAACTGGTTGATTGATGAATTGGGTTTCACTGATTTGTTCAATCAACTCCTTCCCACAATGCCTTGGAATTCTGTTATGGACAAAATGATGATGGAGTTTCATGCAAATGGTGTAACAATTGAAGAGATTGAAAAGGTTCTTCATAGGATTCCAATTCATCACAGAATAGTACCTGCAATTAAAGCAGCTTATGCTTTAGGGTGTGATTTGAGGGTTGTGAGTGATGCTAATATGTTTTACATTGAAACTATTTTGAAGCATTTGGGAATTAGTGAATATTTTTCAGAGATTAACACTAATCCAGGTTATGTTAATGAAGAAGGAAGGGTTAGAATTTCACCTTACCATGACTTCAACAAATGTTCACATGGTTGCACTCTTTGCCCTCCAAACATGTGCAAGGGTTTAATCATTGATAGAATTCAAAATACAATTTCTGAGGTGGATAAGAAGAGGTTCATCTACCTTGGTGATGGTGCTGGTGATTATTGTCCTAGTTTGAGGCTTAGAGAAAGAGACTTTGTGATGCCAAGGAAAAATTTTCCAGTGTGGGATTTGATATGCAAAGATCCTTTACTTATTAAGGCTGAAATTAATGGTTGGAGTGATGGAGAAGAGTTGGAACAAGTTTTGTTGCACTTGATCAATAAAATTATGATGGAGGAACATGTTCAATTCATTTCAACTGATTGCAAGTTGCAAACTCTATCTATTCCTGTGCTTGAATCATTGCCTAAAGCTCTCTCAGTTAGGCCATGA 819 0.3602 MSNIVIVFDFDKTIIDCDSDNWLIDELGFTDLFNQLLPTMPWNSVMDKMMMEFHANGVTIEEIEKVLHRIPIHHRIVPAIKAAYALGCDLRVVSDANMFYIETILKHLGISEYFSEINTNPGYVNEEGRVRISPYHDFNKCSHGCTLCPPNMCKGLIIDRIQNTISEVDKKRFIYLGDGAGDYCPSLRLRERDFVMPRKNFPVWDLICKDPLLIKAEINGWSDGEELEQVLLHLINKIMMEEHVQFISTDCKLQTLSIPVLESLPKALSVRP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2427 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
Tpr5g2427 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 199 IPR006384 GO:0016791
Tpr5g2427 272 SUPERFAMILY HAD-like 4 188 IPR036412 -
Tpr5g2427 272 Gene3D - 1 188 IPR023214 -
Tpr5g2427 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Tpr5g2427 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Tpr5g2427 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Tpr5g2427 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2427 Tpr-Chr5 45901359 45903304 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2427 K13248 - gmx:100785878 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2427 5 45901359 45903304 Tpr7g4854 7 56519453 56521706 ECH
Tpr3g0487 3 4950245 4953952 Tpr5g2427 5 45901359 45903304 ECH
Tpr5g2427 5 45901359 45903304 Tpr5g2427 5 45901359 45903304 ECH