Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2426 ATGTCTAACATTGTTATTGTTTTCGACTTTGACAAAACCATCATTGATTGTGACAGTGATGATTGGGTCATTGATCAATTTGGTTTCACTGATTTCTTCAATCACCTCCTTCCCACCACGCCTTTGAACTCCCTCATGGAAAGAATGATGATGGAGTTTCATTCACATGGTAAAAGCATTGAAGACATTGAAAAAGTTCTTCATAGGATTCCTATTAACCAAAGAATAATTTCTGCAATTAAATCAGCACATGCTTTAGGGTGTGATTTGAGGATTGTGAGCGATTCCAATACATTTTTCATTGAAACGTTTTTGAAGCATTTGGGAATAAGTGAATGCTTCTCAGAGATTAACACTAATCCTGGTTATGTTAATCAAGAAGGAAGATTAAGAATTTTGCCTCATCATGATTTCAATAAGGCTTCACATGGTTGTCCTCTCTGTCCTCCAAATATGTGCAAGGGTTTGATCATAGATAGAATCCAAAGTTCAATTCTTGAAGGGGATAATAATAAGAGGTTTATTTATCTTGGTGATGGTATTGGAGATTATTGTCCTAGTTTGAGGCTTAAAGAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCAGCTTGGGACTTAATATGCAAAGACCCTTCACTTCTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAGTTAGAACAAGTTTTGATGAAGTTGATTAGCAAAATTATGATAGAGGAAAATGTTCAATTCATTTCTTCTGGTTGCAAGCTGCAATCTCTATCAATTCCTGTGCACCAGCCTCCAAAGATAATTCATCTTACAATGCTTGGAATTTAA 828 0.3575 MSNIVIVFDFDKTIIDCDSDDWVIDQFGFTDFFNHLLPTTPLNSLMERMMMEFHSHGKSIEDIEKVLHRIPINQRIISAIKSAHALGCDLRIVSDSNTFFIETFLKHLGISECFSEINTNPGYVNQEGRLRILPHHDFNKASHGCPLCPPNMCKGLIIDRIQSSILEGDNNKRFIYLGDGIGDYCPSLRLKERDFMMPRKNFPAWDLICKDPSLLKAEIHGWSDGEELEQVLMKLISKIMIEENVQFISSGCKLQSLSIPVHQPPKIIHLTMLGI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2426 275 PANTHER INORGANIC PYROPHOSPHATASE 1 269 - -
Tpr5g2426 275 SUPERFAMILY HAD-like 4 190 IPR036412 -
Tpr5g2426 275 Gene3D - 1 189 IPR023214 -
Tpr5g2426 275 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 269 IPR016965 GO:0016791
Tpr5g2426 275 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 200 IPR006384 GO:0016791
Tpr5g2426 275 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Tpr5g2426 275 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 188 - -
Tpr5g2426 275 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2426 Tpr-Chr5 45899796 45908374 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2426 K13248 - gmx:100782134 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4854 7 56519453 56521706 Tpr5g2426 5 45899796 45908374 PCT