Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1670 ATGGCAGAGACGCAATTGAAAGCAGAATCATCTGGTTCAGCTGCACCTCCGGCTGTAGTTGAGGTACCATCATCTAATGTGGCTGTAGCTGAGCCTGAGAAGACACCAGTTCCAGCAAATAAATTAAGCTCAAGAGGAGGATCCTATGATAGGGATATTGCTCTAGCAGAAGTTGCCAAAGAGAAAAAGTTATCTTATGTGAAGGCATGGGAAAAAAGTGAAAAAACCAAAGCAGATAACAAAGCTCAGAAGCACATCTCTTCCATTGCTGCTTGGGAAAACAGCAAGAAGGCAGCTCTTGAAGCTGAGCTTAAAAAAATTGAGGAACAACTAGAGAAAAAGAAAGCACGATATGGTGAAATAATGAAAAACAAGATAGCTTTAGTTCAGAAGGAAGCAGAGGAGAAGAGAGCAGTAATTGAAGCTAAACGAGGTGAAGAGGTTCTCAAGGTAGAGGAAATGGCTGCAAAATACCGTGCAACAGGAACCACTCCAAAGAAAACCATTGGATGTTTTTGA 519 0.4162 MAETQLKAESSGSAAPPAVVEVPSSNVAVAEPEKTPVPANKLSSRGGSYDRDIALAEVAKEKKLSYVKAWEKSEKTKADNKAQKHISSIAAWENSKKAALEAELKKIEEQLEKKKARYGEIMKNKIALVQKEAEEKRAVIEAKRGEEVLKVEEMAAKYRATGTTPKKTIGCF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1670 172 MobiDBLite consensus disorder prediction 1 46 - -
Tpr6g1670 172 PANTHER OS02G0117200 PROTEIN 1 172 - -
Tpr6g1670 172 Pfam Remorin, C-terminal region 62 167 IPR005516 -
Tpr6g1670 172 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 172 - -
Tpr6g1670 172 Coils Coil 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1670 Tpr-Chr6 17993625 17995698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1670 - - gmx:100305679 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1670 6 17993625 17995698 Tpr1g0735 1 6215457 6218236 ECH
Tpr6g1670 6 17993625 17995698 Tpr6g1670 6 17993625 17995698 ECH
Tpr2g3862 2 41404818 41407035 Tpr6g1670 6 17993625 17995698 ECH
Tpr3g0666 3 6471028 6473075 Tpr6g1670 6 17993625 17995698 ECH