Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3862 ATGTATCCACAGAACAAAACTGAACAAGTAATGGGAGAATTAGAAGGTTCCAACTTGAACAAAATAGAATCATCGCAGCCACAGTCTCTGGACTATGTTCTTGAAAATGAATCAGATACTGATGAGAACACTATCACTATCACTATCAACCATGAGCCTAATCAGCAACAGGTCATTTCTCCACTTCATGATCTGAATGCTGGGTTTGAAAGAATTGCAACAGAGAAAAGATTGGCTTTAATTAAAGCATGGGAAGAAAGTGAAAAGACAAAAGTAGAAAACAGGGCATATCAGAGGCAATCTGCAGTTGGATTGTGGGAGGAAAGCACCAAAGCATCTGTAGAGACACAACTCAAAAAATTTGAGGAAAATTTGGAAAGAATGAAGGTTGAGTATGTTTTAAAAATGAAAAATGAAATAGCTGAAATCCATCAGTATGCTGAAGAGAAAAGGGCAATAGTTGAGGCTCAAAAAATGGAAGAATTTCTTGAGCTAGAGGAAACAGCTGCAAAGTTTCGTAGTAGCCGTAGAGTTGCACGAAAGAAATTTTTTGCATGCTTTAGCTGTTGA 570 0.3737 MYPQNKTEQVMGELEGSNLNKIESSQPQSLDYVLENESDTDENTITITINHEPNQQQVISPLHDLNAGFERIATEKRLALIKAWEESEKTKVENRAYQRQSAVGLWEESTKASVETQLKKFEENLERMKVEYVLKMKNEIAEIHQYAEEKRAIVEAQKMEEFLELEETAAKFRSSRRVARKKFFACFSC* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3862 189 Coils Coil 111 138 - -
Tpr2g3862 189 PANTHER CARBOXY-TERMINAL REGION REMORIN 52 188 - -
Tpr2g3862 189 Coils Coil 146 166 - -
Tpr2g3862 189 Pfam Remorin, C-terminal region 76 179 IPR005516 -
Tpr2g3862 189 PANTHER OS02G0117200 PROTEIN 52 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3862 Tpr-Chr2 41404818 41407035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3862 - - aprc:113868558 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3862 2 41404818 41407035 Tpr2g3862 2 41404818 41407035 ECH
Tpr2g3862 2 41404818 41407035 Tpr1g0735 1 6215457 6218236 ECH
Tpr2g3862 2 41404818 41407035 Tpr6g1670 6 17993625 17995698 ECH