Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0666 ATGGAAGAGACATTGAAGAATGAACAATCTATTGACACCCCAAATGCACCACCTGATCAACCTCTAGAGCTTTCCTATTTCGTCGAAGAAAAGAAACCGGAGAATGAAGGTACTTCAAGCAGTATTGTTAAACAAGAGCGCATTGTGCGTGATCATGCTACTTCTCCACTCAATCAAATTCCTCCTGCTGCTGGAACGGATACAAAGGACTCAGTTGACAGAGATGCTGTGCTAGCAAGGGTTGAATCACAGAAAAGATTGGCTTTAATTAAAGCATGGGAAGAAAATGAGAAGACAAAAGTAGAGAACAGAGCATATAAGATGCAATCTGCCGTTGATTTGTGGGAGGATAACAAGAAATCATCAATTGAGGCAAAATTCAAAGGAATTGAGGTAAAATTGGACAAAAAGAAGAGTGAATATATTGAAGTAATGCAAAACAAAAAAGCTGAAATTCATCTATCAGCAGAAGAGAAAAAAGCAATGATTGAAGCTCAAAAAGGGGAAGAAATTGTGAAGGTAGAAGAGACAGCTGCAAAATTTCGTACTCGTGGTTATGAGCCAAGAAGACTTCTTGGATGTTTTGGTTTCGGTGTAAGGGCTTTCCGTTAA 612 0.3889 MEETLKNEQSIDTPNAPPDQPLELSYFVEEKKPENEGTSSSIVKQERIVRDHATSPLNQIPPAAGTDTKDSVDRDAVLARVESQKRLALIKAWEENEKTKVENRAYKMQSAVDLWEDNKKSSIEAKFKGIEVKLDKKKSEYIEVMQNKKAEIHLSAEEKKAMIEAQKGEEIVKVEETAAKFRTRGYEPRRLLGCFGFGVRAFR* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0666 203 MobiDBLite consensus disorder prediction 1 72 - -
Tpr3g0666 203 Pfam Remorin, C-terminal region 85 188 IPR005516 -
Tpr3g0666 203 PANTHER OS02G0117200 PROTEIN 18 196 - -
Tpr3g0666 203 PANTHER CARBOXY-TERMINAL REGION REMORIN 18 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0666 Tpr-Chr3 6471028 6473075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0666 - - vra:106767655 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0666 3 6471028 6473075 Tpr3g0666 3 6471028 6473075 ECH
Tpr3g0666 3 6471028 6473075 Tpr1g0735 1 6215457 6218236 ECH
Tpr3g0666 3 6471028 6473075 Tpr6g1670 6 17993625 17995698 ECH