Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0735 ATGACAGATCAAGAGCAACCAAAAAAGTTAGAATCTGAATCAACATCGAATCCTCCACCACCATCACCACCACCTGCAGCTTCAACTGAAACTGCTACTACTACTCCACCTCCTCCTCCTCCACCTGAGGCTCCAAAGGAATTGGTTGCTGAGGAGAAATCTGTAATTCCACAATCCTCACCTCCTCCTCCTCCTCCTCCTGTTGTTGATGACTCCAAAGCTCTTGTCTTAGTTCAGAAGACTGATGAAGTTGCTGAAGAGAAACCAAAAGAGGGCTCGATCAACCGAGATGCTGTGCTTGAAAGAGTTGCAACAGAAAAGAGGATTTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGGCTCAGAGAAAACTCTCAACCATTACAGCATGGGAAAACAGTAAGAAAGCTGCAACAGAAGCTGAATTGAGAAAACTTGAGGAACAATTGGAGAAGAAAAAGGGAGAATATGCAGAGAAAATGAAAAACAAAATAGCAGCACTTCACAAGCAAGCTGAAGAAAAGAAGGCAATAATTGAGGCCAAGAAAGGTGAAGATTTACTCAAAGCAGAAGAGACAGCTGCAAAATACAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTTGTTTCTAA 654 0.4251 MTDQEQPKKLESESTSNPPPPSPPPAASTETATTTPPPPPPPEAPKELVAEEKSVIPQSSPPPPPPPVVDDSKALVLVQKTDEVAEEKPKEGSINRDAVLERVATEKRISLIKAWEESEKSKAENKAQRKLSTITAWENSKKAATEAELRKLEEQLEKKKGEYAEKMKNKIAALHKQAEEKKAIIEAKKGEDLLKAEETAAKYRATGTAPKKLFGCF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0735 217 MobiDBLite consensus disorder prediction 1 72 - -
Tpr1g0735 217 MobiDBLite consensus disorder prediction 14 45 - -
Tpr1g0735 217 PANTHER OS02G0117200 PROTEIN 8 217 - -
Tpr1g0735 217 Coils Coil 142 184 - -
Tpr1g0735 217 Pfam Remorin, C-terminal region 107 212 IPR005516 -
Tpr1g0735 217 PANTHER REMORIN 1.4 8 217 - -
Tpr1g0735 217 Pfam Remorin, N-terminal region 49 103 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0735 Tpr-Chr1 6215457 6218236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0735 - - cam:101501168 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1670 6 17993625 17995698 Tpr1g0735 1 6215457 6218236 ECH
Tpr2g3862 2 41404818 41407035 Tpr1g0735 1 6215457 6218236 ECH
Tpr3g0666 3 6471028 6473075 Tpr1g0735 1 6215457 6218236 ECH
Tpr1g0735 1 6215457 6218236 Tpr1g0735 1 6215457 6218236 ECH