Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1455 ATGTCTTCTGCTGGTGTATCCACTCTTAGTCCTGTTCCAAGGGAGACATTGTTGTCTCCAACAAATGGATTTTGTAATCCACTGCACTTGTCTGCTAATCATCACGAGTTCATTTTCGTGTATCTTTCCTATTCGGGGTCTTTGTCTCCAATGCGTGTTCTACCCTCGGATACGATTGAGTCTGTGAAGCTCAAGATTCAAAGGAATGAGGGAGTGACAAACAAACAAAAGTTGGTTTGTAATGGTCGCGAGTTATCACGTAGCAATTCTTTGCTCAAGGATTATGGTGTTACCGAAGGAAATGTATTGCATTTGGTTATTCGACTGACAGATCTTCAGACTATCAGTGTGAGAACTGCTTGTGGGAAGGAGTTTACCTTTCAGGTTGAAAGGTGCAGGGATGTTGGGTATGTTAAGCAACAGATTGCGAAAAAGGAAAAAGAGCTTGCTGATCCTGAACAGCAGGAAGTTGTGTGTAATGGGGAGCTGCTTGATGATCAGAAGCTTATTGATGATATCTGTAGCAAATATAATGATGCAGTGATACATCTTTTTGTTAGAACGAAATATGCTGATGTTAATACAGGACTCGAAGAGTTATCTATTGCAGCAAAAGAATTGAATGGTACAAAAAACTGTGATGCTAATGAAAGTGAATATGAGAGGAAATATGATGTTGGTAAAGAAGATGCGAGAAGGGAGTATGAAGCCATCGAGAAAATTATGTCAAGAAAAGCTCTTGACAGAGGTCTTCTTTTGGAGCCGGTTATTATTAACCCTAAGGTTGATTTAGCTTCAGAGGTTTGGGATATGATAAACACTACATATGAAGGGCTAGATAATGGAAATTCTCCAATCAGATCGTCAGAGGGTACAGGAGGGGCTTACTTTATGCTAGACTCAACAGGGCAAAAGTATGTATCGGTTTTTAAGCCTATTGACGAAGAGCCAATGGCTGTGAACAACCCTAGAGGCTTACCTTTGTCGTTAGACGGAGAGGGGTTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGACCATCCAATGAGTGGCCGCCGGTCATTATTTGGTGATGATAAGGGCCTTGCTGGTGTTCCCCCGACTGTTATGGCGAAGTGCTTGCACAAAGGATTTAACCATCCAGAGGGTTTGACTGCTAAGTTTGGTTCCTTGCAAATGTTCATGGAGAATAATGGAAGTTGTGAGGATATGGGACCTCGTTCTTTCCCGGTGAAGGAAGTGCACAAAATCACCGTTCTGGACATGAGACTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGATTGGCAGAGAGAAGGAAAATGGCCAGGCTGTTTTGATTCCAATCGATCATGGATACTGCCTCCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCTCAAGCTCGCCAGCCATACTCTCCAGAGATCATTGACTACATAAAGTCCCTTGATGCCGAAGAAGATATTGCCCTTCTGAAGTTTCACGGATGGGATTTACCACTCGAATGCGCCCGCACTCTCCAAATCTCGACCATGCTTCTGAAAAAAGGTGTGGAAAAAGGGATGACTCCTTTTGCCATCGGAAGCCTAATGTGCCGAGAATCCTTGAACAAAGAGTCCGTGATTGAAGGAATTGTTAAAGCAGCACTTGATTCTGTTCTTCCTTGTACCAGTGAAGCTACTTTTATGGATGCTGTTTCCGAGATTATGGACCAGCACCTTGATGAGATCACTGCCAGCAATTATAATTCTTAA 1797 0.4268 MSSAGVSTLSPVPRETLLSPTNGFCNPLHLSANHHEFIFVYLSYSGSLSPMRVLPSDTIESVKLKIQRNEGVTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLTDLQTISVRTACGKEFTFQVERCRDVGYVKQQIAKKEKELADPEQQEVVCNGELLDDQKLIDDICSKYNDAVIHLFVRTKYADVNTGLEELSIAAKELNGTKNCDANESEYERKYDVGKEDARREYEAIEKIMSRKALDRGLLLEPVIINPKVDLASEVWDMINTTYEGLDNGNSPIRSSEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDDKGLAGVPPTVMAKCLHKGFNHPEGLTAKFGSLQMFMENNGSCEDMGPRSFPVKEVHKITVLDMRLANADRHAGNILIGREKENGQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIKSLDAEEDIALLKFHGWDLPLECARTLQISTMLLKKGVEKGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPCTSEATFMDAVSEIMDQHLDEITASNYNS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1455 598 ProSiteProfiles Ubiquitin domain profile. 38 108 IPR000626 GO:0005515
Tpr5g1455 598 Gene3D - 114 190 - -
Tpr5g1455 598 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 594 - -
Tpr5g1455 598 SUPERFAMILY Protein kinase-like (PK-like) 428 597 IPR011009 -
Tpr5g1455 598 Gene3D - 35 113 - -
Tpr5g1455 598 Pfam Phosphatidylinositol 3- and 4-kinase 291 540 IPR000403 -
Tpr5g1455 598 Pfam Ubiquitin family 44 109 IPR000626 GO:0005515
Tpr5g1455 598 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
Tpr5g1455 598 SMART ubq_7 113 187 IPR000626 GO:0005515
Tpr5g1455 598 SMART ubq_7 38 108 IPR000626 GO:0005515
Tpr5g1455 598 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 594 IPR044571 -
Tpr5g1455 598 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
Tpr5g1455 598 CDD Ubl_ubiquitin_like 115 185 - -
Tpr5g1455 598 SUPERFAMILY Ubiquitin-like 110 188 IPR029071 -
Tpr5g1455 598 PRINTS Ubiquitin signature 47 67 IPR019956 -
Tpr5g1455 598 PRINTS Ubiquitin signature 89 110 IPR019956 -
Tpr5g1455 598 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
Tpr5g1455 598 SUPERFAMILY Ubiquitin-like 31 110 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1455 Tpr-Chr5 27767525 27771102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1455 1 590 Acyl Lipid Metabolism Gene Families AT5G24240 55.946 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1455 - - gmx:100815111 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1455 5 27767525 27771102 Tpr5g1455 5 27767525 27771102 ECH
Tpr5g1455 5 27767525 27771102 Tpr6g0068 6 583366 586631 ECH
Tpr2g3937 2 41999365 42002381 Tpr5g1455 5 27767525 27771102 ECH
Tpr3g0549 3 5476585 5479561 Tpr5g1455 5 27767525 27771102 ECH
Tpr6g0068 6 583366 586631 Tpr5g1455 5 27767525 27771102 PCT