Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3937 ATGTCAGTTGCTGATGTTGCTATGAGGCCGATTTTAAAATCGGCCTCGGCCTCGGCTTCGGCTTCGTCGAATTCACATTGCCATCACCATCACCGTCGTTGCTCCAGCGAATCGATTCTGATCTATCTAACCGTAGACGGAGCAGTTACACCAATGCGTGTATTAGAATCAGATTCAATTGCTTCTGTTAAAATGAGGATTCAAACACGTAAAGGAGTTTCATGGAAGAAACAAAATCTAGTTTCTAATGGAAGAGAGTTATCACGTAATAATAATCTTGTAAAGGATTATGGTGTAACTTCCGGTAATGTCGTTCATTTGGTTCTTCGTTTATCTGATATGATTTTTATCGTTGTTAGAACGATATGTGGTAAGGAATTTGAATTTCAGATCGATCGGAAGAGAAATGTTGCGCATCTTAAACAATGTATTAAGAAAAAAGGGAAAGGTTTTATTGATCTTGTTGAGGAAGAACAAGAATTTTTCTGCTATGGTGAAAAGCTTGATGATAGAAGAATTTTTGATGATATTTGTAAGAATGATGATGATGTTATTCATCTCATTGTTAAAAAATCAGCAAAAGTTAATGCTACAATTGTTCATAATAAAGATTTAGAGCTTTCTGTTGTTGCAGAGAATCATAATTTGAATCAGAATCAGAATGAGGTTGTTAAGGTTATAGAACAAAAACAACCCTGTGATTTTGATTTTTTGTTAGAACCAATTTTTGTGAACCATAGGATCAATTTTTTTCCTTTTCTATGGGACATGATAGATTCAACTTTCAATGGTTTGAAGAAAGGAAATAAGCCTGTGAGATCTTCTGAAGGAACAGGTGGGACTTACTTCATGCAAGATTCAAAAGGTGTAGATTATATTTCGGTTTTCAAGCCGATTGATGAGGAGCCAATGGCGATTAATAATCCACGTGGTTTGCCGGTTTCGTCGAACGGGGAGGGTTTAAAGATAGGGACAAAGGTTGGAGAAGGAGCTGTTAGAGAAGTTGCGGCCTATATATTGGATCATCCGAAGAATGGACCACGTTTGGTGTCCGGTGAAGCAGTTGGTTTTGCTGGTGTTCCACCTACGGTTATGGTTCGGTGTTCACACGAGGCGTTTAATTACTCTAATGGCTCTTTGATGATGGATCACAAGGTGGGGTCTTTGCAAAAGTTTATGAGTAATGATGGTAATTGTGAGGATATTGGACCCGGAGTTTTTCCTGTCGAAGAGGTGCATAAGATCAGTGTGCTTGATATAAGAATGGCGAATGCAGATAGGCATGCAGGGAATATATTGTTTAGAAAAGGGCCAAATGGTGAAATTCTGCTCATTCCCATTGATCATGGCTACTGTCTTCCTGAGAAATTTGAAGATTGCACATTTGATTGGCTTTATTGGCCTCAGGCGCGGCAGCCATACTCTCCCGATACAGTTGATTATATAAACTCTCTGGATGCTGAAAAGGACATAGAGCTTCTGAGACATTATGGTTGGGATGTTCCGGCTGAGTGTGCCAGAACACTCCGCATCTCCACAATGTTATTGAAGAAAGGGGTTGAGAGAGGACTCACTCCATATACCATTGGAAGCATCATGTGCAGAGAAAATTTGAACAAGAAATCCGTAATTGAGGAGATTGTCTGCAAAGCCCAGGAATCATTGCAACCCGACATGGAGGAATCTATTTTTCTCGAATTTGTATCGCAGATCATGGATTCCCGCCTTGGTGAACTTTCGAAATAG 1746 0.3952 MSVADVAMRPILKSASASASASSNSHCHHHHRRCSSESILIYLTVDGAVTPMRVLESDSIASVKMRIQTRKGVSWKKQNLVSNGRELSRNNNLVKDYGVTSGNVVHLVLRLSDMIFIVVRTICGKEFEFQIDRKRNVAHLKQCIKKKGKGFIDLVEEEQEFFCYGEKLDDRRIFDDICKNDDDVIHLIVKKSAKVNATIVHNKDLELSVVAENHNLNQNQNEVVKVIEQKQPCDFDFLLEPIFVNHRINFFPFLWDMIDSTFNGLKKGNKPVRSSEGTGGTYFMQDSKGVDYISVFKPIDEEPMAINNPRGLPVSSNGEGLKIGTKVGEGAVREVAAYILDHPKNGPRLVSGEAVGFAGVPPTVMVRCSHEAFNYSNGSLMMDHKVGSLQKFMSNDGNCEDIGPGVFPVEEVHKISVLDIRMANADRHAGNILFRKGPNGEILLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVDYINSLDAEKDIELLRHYGWDVPAECARTLRISTMLLKKGVERGLTPYTIGSIMCRENLNKKSVIEEIVCKAQESLQPDMEESIFLEFVSQIMDSRLGELSK* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3937 581 Pfam Phosphatidylinositol 3- and 4-kinase 277 529 IPR000403 -
Tpr2g3937 581 Gene3D - 116 205 - -
Tpr2g3937 581 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 268 563 IPR000403 -
Tpr2g3937 581 ProSiteProfiles Ubiquitin domain profile. 41 114 IPR000626 GO:0005515
Tpr2g3937 581 SUPERFAMILY Ubiquitin-like 111 191 IPR029071 -
Tpr2g3937 581 SUPERFAMILY Protein kinase-like (PK-like) 417 579 IPR011009 -
Tpr2g3937 581 SMART ubq_7 39 110 IPR000626 GO:0005515
Tpr2g3937 581 SMART ubq_7 115 190 IPR000626 GO:0005515
Tpr2g3937 581 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 581 IPR044571 -
Tpr2g3937 581 Gene3D - 22 108 - -
Tpr2g3937 581 SUPERFAMILY Ubiquitin-like 22 112 IPR029071 -
Tpr2g3937 581 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 581 - -
Tpr2g3937 581 CDD Ubl_ubiquitin_like 117 188 - -
Tpr2g3937 581 ProSiteProfiles Ubiquitin domain profile. 115 194 IPR000626 GO:0005515
Tpr2g3937 581 Pfam Ubiquitin family 45 111 IPR000626 GO:0005515
Tpr2g3937 581 Pfam Ubiquitin family 117 191 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3937 Tpr-Chr2 41999365 42002381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3937 1 580 Acyl Lipid Metabolism Gene Families AT5G24240 53.859 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3937 - - gmx:100787492 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3937 2 41999365 42002381 Tpr2g3937 2 41999365 42002381 ECH
Tpr2g3937 2 41999365 42002381 Tpr5g1455 5 27767525 27771102 ECH
Tpr2g3937 2 41999365 42002381 Tpr6g0068 6 583366 586631 ECH
Tpr2g3937 2 41999365 42002381 Tpr3g0549 3 5476585 5479561 PCT