Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1112 ATGGCTTCTTCAACTCAATTTGCTCTCACTTTGATTACCCTAACTCTGTTTCAATTCCTAACAGGTTCTTATTCAACAACATTCACAATTGTTAACAAGTGTAGTTACACAGTTTGGCCGGGAATTTTATCCAGTGCCGAATCACCACCGTTCTCCACCACCGGTTTCGCTCTTCAACCCGGCGAATCAAATACCCTCGCCGCACCACCTTCATGGTCCGGCCGTCTATGGGGAAGAACACTCTGCTCTCAAGATCCCACCGGAAAATTCTCTTGCATAACCGGTGACTGTGATTCCTCCGCCGTCGAATGTGCCGGAAAAAACGCAATACCACCAGCAACATTAGCTGAGTTTACACTTAACGGCAACGGCGGACTTGATTTCTTCGACGTTAGTCTCGTCGACGGTTACAATCTCCCGATGTTGATCGAACCGCACGGCGAAACTAGCGGCGGAAATTGCATGACGACGGGTTGTTCTGTTGACTTGAACGTTGCGTGTCCGATGGAATTGAAAGTTATGAGTAGTAACGGTACTGGTGTGGGAGTCGCGTGTAAAAGCGCGTGTGAAGCTTTTGGGGATCCACAGTATTGCTGTAGTGGCGATTTTGCTACGCCAGCTACATGTAAACCAAGTTCCTACTCGCAGTTTTTTAAGAGTTCGTGTCCACGCGCTTATAGTTATGCTTATGATGATGGAACTAGCACTTTCACTTGTGCCTCTGCTGATTATACCATCACTTTTTGCCCCACAGCTTCCACAAGTCCAATCAAGTCTGGGAATGAGAAATATCCAATACCGGTGTCGGATGTATCAGGTGTGTCTGATGTTCGACATATAAGAACGGTCAACAATGTTTTGATGATGATGAGTGTGGTCTTTGTTTTGATGCATTTGGTGTTTTATCGGTTGTAA 915 0.4612 MASSTQFALTLITLTLFQFLTGSYSTTFTIVNKCSYTVWPGILSSAESPPFSTTGFALQPGESNTLAAPPSWSGRLWGRTLCSQDPTGKFSCITGDCDSSAVECAGKNAIPPATLAEFTLNGNGGLDFFDVSLVDGYNLPMLIEPHGETSGGNCMTTGCSVDLNVACPMELKVMSSNGTGVGVACKSACEAFGDPQYCCSGDFATPATCKPSSYSQFFKSSCPRAYSYAYDDGTSTFTCASADYTITFCPTASTSPIKSGNEKYPIPVSDVSGVSDVRHIRTVNNVLMMMSVVFVLMHLVFYRL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1112 304 CDD TLP-PA 27 249 - -
Tpr2g1112 304 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tpr2g1112 304 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Tpr2g1112 304 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Tpr2g1112 304 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Tpr2g1112 304 ProSiteProfiles Thaumatin family profile. 25 252 IPR001938 -
Tpr2g1112 304 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Tpr2g1112 304 Gene3D Thaumatin 26 250 IPR037176 -
Tpr2g1112 304 SMART tha2 28 250 IPR001938 -
Tpr2g1112 304 PIRSF PR5 1 295 IPR001938 -
Tpr2g1112 304 Pfam Thaumatin family 32 250 IPR001938 -
Tpr2g1112 304 PANTHER OS03G0233200 PROTEIN 12 265 IPR001938 -
Tpr2g1112 304 PANTHER OS09G0536300 PROTEIN 12 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1112 Tpr-Chr2 13074975 13077057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1112 7 255 Receptor kinase-like Gene Family AT5G38280 50.996 4.71e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1112 - - gmx:100807106 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1112 2 13074975 13077057 Tpr4g4281 4 49949174 49951094 ECH
Tpr7g0225 7 1859940 1862920 Tpr2g1112 2 13074975 13077057 ECH
Tpr2g1112 2 13074975 13077057 Tpr2g1112 2 13074975 13077057 ECH
Tpr2g1112 2 13074975 13077057 Tpr4g4282 4 49974684 49977319 PCT