Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4281 ATGGAAGCTTCAACTCAAATTTCTATCACTATTCTCTTTCTATTTCATTCCTTAAGAGGTTTACATTCCGCCACATTTACAATTGTAAACAAGTGCAGTTACCCTGTTTGGCCGGGGATTTTGTCCGGTGCTGGAACGGTACAACTAGCAACGAAAGGCTTTGACCTAAAACCGGGTGAATCCAACGATGTTGCTGTGCCAACAGGTTGGTCCGGCCGCATATGGGGCCGAACACTTTGTTCCACTGACTCTGCTGGAAAATTCTCTTGCATCACCGGAGACTGTGGCTCCTCTAAGGTAGAATGCAGCGGCAGCAGTGCTATCCCGCCTGCAACACTCGCGGAGTTCACCTTGAACGGTGCTGGAGGAATGGATTTCTACGACGTCAGCCTGGTGGACGGTTACAACCTTCCCATGTTGATAGAACCGCATGGCAGCGGAGGAAACTGCACGAGGGCAGGTTGTTCGGTGGACTTAAACGGATGGTGTCCGACGGAGCTGAAGGTGAAAGTTGCAGTGGAAGGAGAAGCGAATGGTGAGAAGAGTGTGGCATGTAAAAGCGCATGTGAAGCATTTGGGGATCCATTATACTGCTGCAGTGGCGCTTATGCGACTCCGCAGACATGTAAGCCAAGTTCGTACTCACAATTCTTCAAGAGTGCGTGCCCGCGCGCTTATAGCTATGCCTACGATGATGGTACTAGCACCTTCACTTGTACCTCCGCGGATTATCTCATTACTTTCTGTCCCTTACATTCCAACAGTTCAATCAAGTCAGGGAATGGAAAATTCCCATTTGGAGTGGACATATGGGCCGGACACGACCGTGGCCATGCTGATGAGCCAACCAACATGATGACACTAGTTATTGGCACTGTTCTGATGACAATTTGGTGGCAACTGATCAGTTAG 912 0.4934 MEASTQISITILFLFHSLRGLHSATFTIVNKCSYPVWPGILSGAGTVQLATKGFDLKPGESNDVAVPTGWSGRIWGRTLCSTDSAGKFSCITGDCGSSKVECSGSSAIPPATLAEFTLNGAGGMDFYDVSLVDGYNLPMLIEPHGSGGNCTRAGCSVDLNGWCPTELKVKVAVEGEANGEKSVACKSACEAFGDPLYCCSGAYATPQTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCTSADYLITFCPLHSNSSIKSGNGKFPFGVDIWAGHDRGHADEPTNMMTLVIGTVLMTIWWQLIS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4281 303 PIRSF PR5 1 272 IPR001938 -
Tpr4g4281 303 PANTHER THAUMATIN-LIKE PROTEIN 1 5 264 - -
Tpr4g4281 303 Pfam Thaumatin family 30 250 IPR001938 -
Tpr4g4281 303 CDD TLP-PA 25 249 - -
Tpr4g4281 303 SUPERFAMILY Osmotin, thaumatin-like protein 24 250 IPR037176 -
Tpr4g4281 303 SMART tha2 26 250 IPR001938 -
Tpr4g4281 303 Gene3D Thaumatin 24 250 IPR037176 -
Tpr4g4281 303 ProSiteProfiles Thaumatin family profile. 23 252 IPR001938 -
Tpr4g4281 303 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Tpr4g4281 303 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Tpr4g4281 303 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Tpr4g4281 303 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Tpr4g4281 303 PANTHER OS03G0233200 PROTEIN 5 264 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4281 Tpr-Chr4 49949174 49951094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4281 7 250 Receptor kinase-like Gene Family AT5G38280 53.600 9.80e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4281 - - gmx:100809419 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1112 2 13074975 13077057 Tpr4g4281 4 49949174 49951094 ECH
Tpr7g0225 7 1859940 1862920 Tpr4g4281 4 49949174 49951094 ECH
Tpr4g4281 4 49949174 49951094 Tpr4g4281 4 49949174 49951094 ECH