Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0225 ATGGATCAACTAATTACAAAATTATTTTCAATTTTCCTTACACTTTATATTTCAACACCAGGAGTAGCATCAACAACATTCACACTCCTTAACAAATGCAATTACACAGTGTGGCCGGGAATTCTCTCCAACGCCGGCGTTGCGCCACTTCCAACCACCGGTTTCGTTCTTCAATCCGGCGAATCCAAATCAATCACTCCACCTTCTTCCTGGGGAGGTCGTTTCTGGGGACGCACACTCTGTTCTCAAGACTCCACCGGAAAATTCTCCTGTCTCACCGGCGATTGTAACTCCGGCAAACTCGAATGCTCCGGTAACGGAGCAACACCACCGGCTACTTTAGCAGAATTCACTCTCGACGGATCCGATGGACTCGATTTCTTCGACGTGAGTTTGGTCGACGGTTATAACGTTCCTATGCTTGTTGTTCCACAAGGTGGCTCCGGTGATAACTGTAAAAGTACCGGTTGTGTTGAGGATTTACTCGGCGCGTGTCCTTCAGAGCTTAAGGTTACGAGCGTGGATGGGAAAGAGAGTGTGGCGTGTAAAAGTGCTTGTGAAGCGTTTGGATCGGCGCAGTATTGTTGCAGCGGCGCGTATGGTTCACCTAACACTTGTAAACCTTCAAGTTATTCTGAGTTGTTTAAGAATGCTTGCCCACGCGCTTATAGCTACGCGTATGATGATAAGACAAGCACGTTTACTTGTGCTTCTGCGGCTGAATACATAATCACGTTTTGCCCTTCCACTAACAGCAACAAACCCAGTAAAAAATCGTGGGAGGGACAAAATCCGAAATCAGATGGCAGTGACTCATCATCATCACCCCAGCTTAACAACGGTTCAATGGTGTACGTTGGTGCATTCGATCAGAGTGAAATATCATGGGCCACGTGTACTAATGTATGGGAATCCCAAACCATTCTTCTCACCGTTACAACGGCTATGTGGCTATTGTGTCATTTTCTCCACTTGTAA 978 0.4652 MDQLITKLFSIFLTLYISTPGVASTTFTLLNKCNYTVWPGILSNAGVAPLPTTGFVLQSGESKSITPPSSWGGRFWGRTLCSQDSTGKFSCLTGDCNSGKLECSGNGATPPATLAEFTLDGSDGLDFFDVSLVDGYNVPMLVVPQGGSGDNCKSTGCVEDLLGACPSELKVTSVDGKESVACKSACEAFGSAQYCCSGAYGSPNTCKPSSYSELFKNACPRAYSYAYDDKTSTFTCASAAEYIITFCPSTNSNKPSKKSWEGQNPKSDGSDSSSSPQLNNGSMVYVGAFDQSEISWATCTNVWESQTILLTVTTAMWLLCHFLHL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0225 325 MobiDBLite consensus disorder prediction 255 276 - -
Tpr7g0225 325 PANTHER BNAA02G17480D PROTEIN 12 274 - -
Tpr7g0225 325 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Tpr7g0225 325 Gene3D Thaumatin 25 248 IPR037176 -
Tpr7g0225 325 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Tpr7g0225 325 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Tpr7g0225 325 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Tpr7g0225 325 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Tpr7g0225 325 CDD TLP-PA 26 247 - -
Tpr7g0225 325 SUPERFAMILY Osmotin, thaumatin-like protein 25 249 IPR037176 -
Tpr7g0225 325 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
Tpr7g0225 325 Pfam Thaumatin family 31 248 IPR001938 -
Tpr7g0225 325 PANTHER OS03G0233200 PROTEIN 12 274 IPR001938 -
Tpr7g0225 325 SMART tha2 27 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0225 Tpr-Chr7 1859940 1862920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0225 5 267 Receptor kinase-like Gene Family AT5G38280 52.434 8.13e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0225 - - gmx:100780102 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0225 7 1859940 1862920 Tpr2g1112 2 13074975 13077057 ECH
Tpr7g0225 7 1859940 1862920 Tpr4g4281 4 49949174 49951094 ECH
Tpr7g0225 7 1859940 1862920 Tpr7g0225 7 1859940 1862920 ECH