Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0285 atggaaaataaTTTACCAATAATAGCAAAGAGAGTGAGGAGCATAGTGCGCGTGGCCTTCTTCATGTTACGAAAAGGCATCTCAAAGGGAAAACTTATGATGCAACTCAACCTCATGATGCTCAAACGCCGCCGCAAAGCCATTTCCAACCTCGTGTTCCACCAcggcgccgccgccgccgcctccGCCCAACGCGAGTACGAGTTCAGCTGCAGCAACACGCCAAACAACTACTTCTTCTTTCCTAGGCGCCACCACACCCACGCGCATGACTTGTTCGCGTGTGCCCACGCGCCACCCACTTTGGACGACGAGGTGGTGACCGTGAGGGCCGTGTTGGAGATGCTCAACAATAATGAGGTCTTCGTAGAGGCCGCCGTGGCAGCGGCATCCCCCGCGCTTCCCGGGTTTGGCCGGAGCCCCGCCGCGCCGGTGCGGCAGCTGAGGGTGACGGACTCGCCGTTCCCGTTGCGGGATAACGACGGCGGCGGCGAGGACCACCACGTGGACAAGGCGGCGGAAGAGTTCATCAAGAGGTTTTATAAGGAGTTGAGGAAGCAGacttga 567 0.5414 MENNLPIIAKRVRSIVRVAFFMLRKGISKGKLMMQLNLMMLKRRRKAISNLVFHHGAAAAASAQREYEFSCSNTPNNYFFFPRRHHTHAHDLFACAHAPPTLDDEVVTVRAVLEMLNNNEVFVEAAVAAASPALPGFGRSPAAPVRQLRVTDSPFPLRDNDGGGEDHHVDKAAEEFIKRFYKELRKQT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0285 188 Pfam Cotton fibre expressed protein 168 187 IPR008480 -
Sto9g0285 188 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 187 - -
Sto9g0285 188 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0285 Sto-Chr9 2696481 2697047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0285 - - qsu:111990887 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0285 9 2696481 2697047 Sto1g0300 1 2276272 2276895 CCT
Sto9g0285 9 2696481 2697047 Sto1g0300 1 2276272 2276895 ECH
Sto10g3161 10 40952673 40954262 Sto9g0285 9 2696481 2697047 ECH
Sto8g2051 8 13333690 13335744 Sto9g0285 9 2696481 2697047 ECH
Sto9g0285 9 2696481 2697047 Sto9g0285 9 2696481 2697047 ECH
Sto9g0285 9 2696481 2697047 Sto5g0667 5 4497583 4498143 ECH
Sto9g0285 9 2696481 2697047 Sto9g3471 9 34076281 34078765 ECH