Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g2051 ATGGAAACAGAGACGAAAGCTCCGGTGGTAGCGAAGAAGGTGTGGAGCGTAGTGCGCGTGTTGCTGGTAATGTTAAGAAAAGGCATAGCCAAGACCAAAATCATGCTCGAGCTCAATTTGCTGCTCAAGCGCGGGAAGCTCGCCGGAAAAGCCTTCGCCGACGGCACTCACATGCTCCACCACCACCTCGCCGCCGCCTTCGCCTCCCGCTCCTCCCACCACCACTCCTTCATCTCCCCGCGCGACTACGAGTTCAGCTGCAGCAACAGCCCCGCGTTCCCCTTCGCCCACGCCATGAAGGCGACGAAGCGCAGCAAACAGAAGACGTTCCAATACGACGACGTGACGACCGTGAGCGCGGTCCAGAAGGTTCTGGAGATGCTGAACAACAGCGATCAGAGCCAGAGGAATAATCATCATATGGTGGAAGCGTCGCCGTTAGTGACGTTACCGGGCTTCGGAAAGAGCCCAATCGGAAGGCAGCTGAGAGTGACGGACTCGCCGTTTCCGTTAAAGGACGAGGGAGATAGCCAAGTGGATAAGGCAGCGGAAGAGTTCATCAAGAAGTTCTATAAGGAGCTCAACTTGCAGAGAACAATGGCGGTTATAGATTCACCTTACCATAAGTGCTTGTGGGACCGCGCAGGAGCGGAACCGGATCCTCTGCCTTCAATTGTCTCTGCCTTCAATTTGCCATTACTTGAACGGCGCCGTTTtgACAGAGTTTGCTTCAGCCATGGTGGGTTTTCTCCTGGAACTGTTGATGCCTTCTTCATACTTTCATCTCCTACTTCGCAAAATAAAAGATTATAG 813 0.5351 METETKAPVVAKKVWSVVRVLLVMLRKGIAKTKIMLELNLLLKRGKLAGKAFADGTHMLHHHLAAAFASRSSHHHSFISPRDYEFSCSNSPAFPFAHAMKATKRSKQKTFQYDDVTTVSAVQKVLEMLNNSDQSQRNNHHMVEASPLVTLPGFGKSPIGRQLRVTDSPFPLKDEGDSQVDKAAEEFIKKFYKELNLQRTMAVIDSPYHKCLWDRAGAEPDPLPSIVSAFNLPLLERRRFDRVCFSHGGFSPGTVDAFFILSSPTSQNKRL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g2051 270 Pfam Cotton fibre expressed protein 177 199 IPR008480 -
Sto8g2051 270 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 2 208 - -
Sto8g2051 270 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 2 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g2051 Sto-Chr8 13333690 13335744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g2051 - - zju:107411296 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2051 8 13333690 13335744 Sto9g0285 9 2696481 2697047 ECH
Sto8g2051 8 13333690 13335744 Sto1g0300 1 2276272 2276895 ECH
Sto8g2051 8 13333690 13335744 Sto5g0667 5 4497583 4498143 ECH
Sto8g2051 8 13333690 13335744 Sto9g3471 9 34076281 34078765 ECH
Sto8g2051 8 13333690 13335744 Sto8g2051 8 13333690 13335744 ECH