Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0667 ATGGATCCGGGGAGGCCGGCGGCCGTGGTGGAGAAACTATGGAAAACGGTGCGTTTAATCCGCTTCCTCTTACAAAACGGTGTGTCCAAAAGCAAGGTCATGAACGACGTCCAGCTCATGATGAAACGAGGCAAGCACTTGGGGAAGACTCTGAATAACGCCATGGTCCGCCACCACGAGGCCTTGACTTGCCGCTCACGTGACGCCCACGTGTCCTTCGTCTCACCCTTGGAGTACCAGTTCAGCTGCAGCGGCAGCCCACCTCGGCTTTCCTACTCTCAACACCACGCGCTCCACTATAGTTGTCGGGATCATAGGATGGTAGGACTATGTCGTGGCAACGAGGAGACGTTGGTGATGGGGCATTATCCAATGAGAGGGCGAGTGAAGATAACGGGGCCTGCTTCCTTGTTAAGCGACGACGTCGTAGAACAGGAATACCGCTTGGGCGTCGACGAGGCTGCTGAAGAATTCATAGAGAGGTTTTACAGAGACTTGAGGTTGCAGAAATGGTTGGATCACTGTTGCTGA 531 0.5424 MDPGRPAAVVEKLWKTVRLIRFLLQNGVSKSKVMNDVQLMMKRGKHLGKTLNNAMVRHHEALTCRSRDAHVSFVSPLEYQFSCSGSPPRLSYSQHHALHYSCRDHRMVGLCRGNEETLVMGHYPMRGRVKITGPASLLSDDVVEQEYRLGVDEAAEEFIERFYRDLRLQKWLDHCC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0667 176 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 174 - -
Sto5g0667 176 Pfam Cotton fibre expressed protein 150 170 IPR008480 -
Sto5g0667 176 PANTHER DUF761 DOMAIN PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0667 Sto-Chr5 4497583 4498143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0667 - - gmx:102661306 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0667 5 4497583 4498143 Sto5g0667 5 4497583 4498143 ECH
Sto5g0667 5 4497583 4498143 Sto9g3471 9 34076281 34078765 ECH
Sto10g3161 10 40952673 40954262 Sto5g0667 5 4497583 4498143 ECH
Sto8g2051 8 13333690 13335744 Sto5g0667 5 4497583 4498143 ECH
Sto9g0285 9 2696481 2697047 Sto5g0667 5 4497583 4498143 ECH
Sto1g0300 1 2276272 2276895 Sto5g0667 5 4497583 4498143 ECH