Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0221 ATGAACGGTGGCGATGAGGTCGTCGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTCTCGCAGGTTTTTGGTGAACGTACGGCTGGGGAAGAAGTTCAGGAAGggtttggtttCATGCTCTCGATCTATTTTGGATCGTGGTTCAGCAGTCACTTCTTGTTTCGGCTACCGGGTCATTGCGTTATCATTGTGGGTCAGGTTGTTATTTGTTCCTTAAACGGTTTGACCGCGCCAAACAGTAACGAACGGCCGAAATTGCCGCGTTCTAGTACTGTGGACATAATTTCTGCCATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTAGAGTAGTCCTCTTTGAGAGGACGGATATGAAAGATCATGGTGGGCAAAGAAGGGATTTGGAAAGGATGGATTATTCTATAAGTAGGCATCCTGAGTTCCGTTATAAAACTGAGTTTCAGAGTCACGAACCTGAGTTTGACTATCTTAAGAGTTtggaaattgaagagaaaataaacaaaatcagATGGTGCCAAACAGCTAACGGTGCTCTGTTTCTTCTATCTACAAATGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAAAAGGTCAAGAAAATTTCTGAGATGAATGTTGACCCTCTGAAAGCAATGGGAAATGGCTGTGTTGGTAGTGTTGCTAGTTCAAGTAATTCAAGTAGCTCTAGGCCATATCTTGCAAATGGAGGATCTGCAGACAAATCATACAGTTATTTAAGCAATGACTTCTCATTTCCACCAGGGGGCATCCCATCATTAAGATTACCTGTGGTAACCAGCCATGAGACCAGCCTTGTAGCTCGATGTCGTAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATATCAAGTAACAGTGACGGTGAAACTTTCATATCTGCTGATGATTTGCGGATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAACATGGAGGACCTGACTGATGAGCTCAATGAATCACCCCATATGCTCAGATACAAGTCTTGGATGAGGCTTGACCCTGGAAGTTTGATTGCAGAGGTTATAACATCGGCCGAGTTCCACCCTACCCATTGTAATATGTTGGCCTATAGCAGTTCAAAGGGTTCAATCCGTCTTGTCGATTTACGCCAGTCAGCATTATGTGATTCTCATGCCAAACTATTTGAAGAGCAGGAGGCCCCAGGGTCCAGGTCATTTTTCACAGAGATTATTGCTTCAATCTCAGATATAAAATTTGGGAAGGATGGAAGATATATACTTAGTCGTGATTACATGACTCTAAAGTTATGGGACATTAATATGGATTCTGGCCCAGTTGCTACTTTCCAGGTTCATGAATATCTAAGACCTAAGCTGTGTGATTTGTATGAAAATGATTCGATTTTTGACAAGTTCGAGTGTTGTCTGAGTGGTGATGGATTGCGTGTAGCAACTGGTTCTTACAGTTATATTCCATGTGGTCCCAGCAACCTATTCCGTGTGTTTGGCTGTGTCCCGGGAAGTACTGAAGCTACAACCTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCAGACCCCTGCAAGGCCTTCTAGATCACTGGGAAGTAGTTTAACTCGAGTTGTACGACgagGAGCTGAAAATCCCGGTGTGGATGCAAATGGGAACTCTTTTGATTTCACAACAAAGTTGCTGCACTTAGCATGGCACCCATCCGAAAATTCAATCGCTTGTGCTGCTGCAAATAGCTTGTACATGTACTATGCATAA 1824 0.4216 MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEGFGFMLSIYFGSWFSSHFLFRLPGHCVIIVGQVVICSLNGLTAPNSNERPKLPRSSTVDIISAIEFDKSGDHLATGDRGGRVVLFERTDMKDHGGQRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPLKAMGNGCVGSVASSSNSSSSRPYLANGGSADKSYSYLSNDFSFPPGGIPSLRLPVVTSHETSLVARCRRVYAHAHDYHINSISSNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTDELNESPHMLRYKSWMRLDPGSLIAEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSYIPCGPSNLFRVFGCVPGSTEATTLEASKNPMRRQVQTPARPSRSLGSSLTRVVRRGAENPGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0221 607 Gene3D - 357 605 IPR015943 GO:0005515
Sto9g0221 607 SUPERFAMILY WD40 repeat-like 95 506 IPR036322 GO:0005515
Sto9g0221 607 PIRSF PPA2_B55 13 39 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PIRSF PPA2_B55 84 350 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PIRSF PPA2_B55 364 607 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 102 122 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 149 177 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 178 206 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 294 321 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 322 349 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 576 605 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 93 347 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 37 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 368 607 IPR000009 GO:0000159|GO:0019888
Sto9g0221 607 SMART WD40_4 162 202 IPR001680 GO:0005515
Sto9g0221 607 SMART WD40_4 417 455 IPR001680 GO:0005515
Sto9g0221 607 SMART WD40_4 283 322 IPR001680 GO:0005515
Sto9g0221 607 SMART WD40_4 364 398 IPR001680 GO:0005515
Sto9g0221 607 SMART WD40_4 84 123 IPR001680 GO:0005515
Sto9g0221 607 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 162 176 IPR018067 -
Sto9g0221 607 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 93 347 - -
Sto9g0221 607 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 37 - -
Sto9g0221 607 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 368 607 - -
Sto9g0221 607 Pfam WD domain, G-beta repeat 286 322 IPR001680 GO:0005515
Sto9g0221 607 Gene3D - 91 336 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0221 Sto-Chr9 2028638 2036338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0221 K04354 - gmx:100799449 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0221 9 2028638 2036338 Sto1g0363 1 2940133 2948255 CCT
Sto9g0221 9 2028638 2036338 Sto1g0363 1 2940133 2948255 ECH
Sto9g0221 9 2028638 2036338 Sto9g0221 9 2028638 2036338 ECH
Sto9g0221 9 2028638 2036338 Sto5g1043 5 7015386 7021547 ECH
Sto9g0221 9 2028638 2036338 Sto9g3454 9 33955703 33962554 ECH