Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2230 ATGGATTCAATTCAAGAGTTTATGGACTCATGTAACTCtgacatcaccaccaccacaaccaccatcGCCACCGCCAGCAACAGCTTAGTTGGTAGCTCCAATTCCCCTTCTGCTTCCTCCACCACCAGCAGCCGCTATGAGAACCAAAAGCGCCGTGACTGGAACACCTTTGGCCAGTACCTCAAGAATCACCGACCCCCTCTCTCCCTCTCCAGGTGCAGCGGTGCACACGTCCTTGAGTTTCTCAGGTACTTGGACCAATTTGGCAAGACCAAAGTGCACACTCCGATCTGTCCTTTTTATGGGCATCCAAACCCTCCAGCTCCATGTCCATGCCCTCTAAGGCAAGCCTGGGGTAGCCTTGACGCCCTCATAGGTCGTTTGAGGGCAGCTTTTGAGGAAAACGGAGGGAAGCCTGAAACCAACCCATTTGGAGCGAGAGCTGTGAGGCTCTACCTTCGTGAGGTTCGTGAACTTCAGTCCAAAGCAAGAGGGATCAGTTATGAGAAGAAGAAACGAAAGcgtccaccaccaccaccaccaccgccgccgccgcctccaccacaacaacaactacAACAAACATTGCCTCTACCTCATCACCGCCACCTCCCTCCCCCAGGTGCAACTCAATAA 636 0.4544 MDSIQEFMDSCNSDITTTTTTIATASNSLVGSSNSPSASSTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRELQSKARGISYEKKKRKRPPPPPPPPPPPPPQQQLQQTLPLPHHRHLPPPGATQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2230 211 MobiDBLite consensus disorder prediction 27 45 - -
Ssu7g2230 211 MobiDBLite consensus disorder prediction 162 211 - -
Ssu7g2230 211 MobiDBLite consensus disorder prediction 178 193 - -
Ssu7g2230 211 PANTHER PROTEIN G1-LIKE2 1 211 IPR040222 -
Ssu7g2230 211 Pfam ALOG domain 38 158 IPR006936 -
Ssu7g2230 211 MobiDBLite consensus disorder prediction 162 176 - -
Ssu7g2230 211 MobiDBLite consensus disorder prediction 27 49 - -
Ssu7g2230 211 PANTHER G1-LIKE PROTEIN 1 211 - -
Ssu7g2230 211 ProSiteProfiles ALOG domain profile. 45 172 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2230 Ssu-Chr7 43972591 43973511 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2230 - - gmx:100803605 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2230 7 43972591 43973511 Ssu7g1570 7 32900259 32900810 ECH
Ssu7g2230 7 43972591 43973511 Ssu7g2230 7 43972591 43973511 ECH
Ssu7g2230 7 43972591 43973511 Ssu4g1222 4 19460419 19461322 ECH
Ssu7g1407 7 30264974 30266407 Ssu7g2230 7 43972591 43973511 ECH
Ssu7g2230 7 43972591 43973511 Ssu4g1222 4 19460419 19461322 PCT