Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1570 ATGGATTTGGTTTCGGAATCAGCAAACCCCAGGTACAAGATGGAGACCCCTGCCGCGAATCCAACGACAGGAAGCGCGGCAGTGTCGTCTCCGTCTTCGGGAAGCAACAGCGGAAGTACCACTCCTAGCCGTTACGAAAACCAAAAGCGGCGGGACTGGAACACGTTCTGCCAGTACCTGCGGAACCACCGTCCACCGCTCTCGTTGGCCCTGTGCAGCGGCGCGCACGTGCTGGAATTCCTCCACTACCTCGACCAGTTCGGGAAGACCAAGGTTCACAACCACCCTTGCCCTTTCTTCGGACTCCCGAACCCTCCGGCACCGTGTCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCTCTCATCGGCCGCCTCCGGGCAGCGTACGAGGAAAACGGAGGCAGGCCGGAGACCAACCCGTTCGGTGCACGCGCCGTGAGGATTTACCTGCGCGATGTTCGTGACTTTCAGGCGAAGGCGAGAGGTGTTAGCTatgagaagaagaggaagaggccGAAGCCCAAGGTCACTCCCGCTCCTACTTAG 552 0.5924 MDLVSESANPRYKMETPAANPTTGSAAVSSPSSGSNSGSTTPSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQAKARGVSYEKKRKRPKPKVTPAPT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1570 183 MobiDBLite consensus disorder prediction 163 183 - -
Ssu7g1570 183 PANTHER PROTEIN G1-LIKE5 1 177 - -
Ssu7g1570 183 MobiDBLite consensus disorder prediction 1 47 - -
Ssu7g1570 183 ProSiteProfiles ALOG domain profile. 44 171 IPR006936 -
Ssu7g1570 183 MobiDBLite consensus disorder prediction 16 44 - -
Ssu7g1570 183 PANTHER PROTEIN G1-LIKE2 1 177 IPR040222 -
Ssu7g1570 183 Pfam ALOG domain 40 157 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1570 Ssu-Chr7 32900259 32900810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1570 - - gmx:102663941 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2230 7 43972591 43973511 Ssu7g1570 7 32900259 32900810 ECH
Ssu4g1222 4 19460419 19461322 Ssu7g1570 7 32900259 32900810 ECH
Ssu7g1407 7 30264974 30266407 Ssu7g1570 7 32900259 32900810 ECH
Ssu7g1570 7 32900259 32900810 Ssu7g1570 7 32900259 32900810 ECH