Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1407 ATGGTAAGTTCACAAATCCTACTAGTGTCTACTACTTGTGTGCAACTATGGTTGATGATCCCATTTTTTCCCAAACTAAACACCACCTCATCATCACCACCCTCTTCCTCCTCGACCACTCTGAGCCGCTACGAGAACCAAAAGCGCCGCGACTGGAACACCTTCGGGCAGTACCTGAGGAACCACAGACCCCCACTCTCGCTCTCCCGCTGCAGCGGCGCGCACGTGCTCGAATTCCTGAGGTACCTCGACCAGTTCGGGAAAACCAAGGTTCACACGCAGCTTTGTCCCTTCTTCGGCCACCCAAACCCGCCTGCACCCTGCCCTTGCCCTCTACGCCAAGCATGGGGCAGCCTCGACGCCCTCATAGGCCGCCTCAGAGCTGCCTTCGAAGAAAATGGAGGCAAGCCTGAGGCTAACCCTTTCGGCGCCCGCGCCGTCAGACTCTACCTTCGTGAAGTGCGTGATTCGCAAGCCAAGGCTAGGGGAATTAGCTACGAGAAAAAAAAGCGCAAGCGTCCCCAACAACTACAACACCCCCCTCCGCTGCCTCCGTCAAATAATGCAAGTTAG 573 0.562 MVSSQILLVSTTCVQLWLMIPFFPKLNTTSSSPPSSSSTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQQLQHPPPLPPSNNAS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1407 190 MobiDBLite consensus disorder prediction 157 190 - -
Ssu7g1407 190 Pfam ALOG domain 36 156 IPR006936 -
Ssu7g1407 190 PANTHER G1-LIKE PROTEIN 29 181 - -
Ssu7g1407 190 ProSiteProfiles ALOG domain profile. 43 170 IPR006936 -
Ssu7g1407 190 PANTHER PROTEIN G1-LIKE2 29 181 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1407 Ssu-Chr7 30264974 30266407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1407 - - gmx:100806497 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1407 7 30264974 30266407 Ssu7g1407 7 30264974 30266407 ECH
Ssu7g1407 7 30264974 30266407 Ssu7g1570 7 32900259 32900810 ECH
Ssu7g1407 7 30264974 30266407 Ssu7g2230 7 43972591 43973511 ECH
Ssu7g1407 7 30264974 30266407 Ssu4g1222 4 19460419 19461322 ECH