Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0609 ATGCAtagaagggagagagagaaatcgATGAAAGAAGGCACGTACCCGCAAAGGAGAAGAACCCCTTccttctcctcttctcttctcgACGCCATTTACCGTTCCACCGACGAATCAAAAACCAGCCTTCACGAGGATCAACACCCGGGTCTCTACGATGGTCAAACCACCCACACCTCCAAACACAATTTCAACGGTGTCTACTCCGAAAAACGCGGCGGCAAAGAGAGAATGAATCTTCGCCGAGCAGTGATGCTAGAAGATTGGATGGAGAAGCATAGTTCCCATTCCCACGGTAATTCTCAATTGCTAAACTCGAGTTCAAGCTCCTCAGAATGCAGCTCTGGGGGAATATTTTCCTCTTCAGAAACAGACACAACCACGTTAAAGAAACAAAGGGCAAGGCCCACGTCGGAGAAGAAAAAGCAGGACCACAGGATTTCGGAGAAGCAGAATAAGCCTCAGAGAGAAGGTGGTTTTGAAAGGACCAAGTTGCGGGCGTTGAAAATTTACGGCGAATTGAATCAGAAAGTGAAGCAACCCATTTCACCAGGGAGTAGAATAGCTAGCTTCCTTAGCTCCATCTTCAACTCTCAGAATGTGAAGAAAGCCAAAATGTGTTACGTTGGAGCTGTTGAAGACGTTAGTTTCGAGCATAAATCCAAATCCCCGTGTTTCTCTTCCACTCCTTCTTCGTTTTCGAGAAGGTCTTGCATGAGCAAAACACCCTCTAAAAAATCCAACAACGGGGTTAAAAGATCCGTGAGGTTTTACCCCGTTAGCGTAATCCTAGGTGAGGATTCTGAGCCACAATCCGGTCACAAATGTAACAACATTTATGAGAGTGAACCTAATCTTAGTGTGAGAAAGATTACGAGAAGTTCTTCGATAAAGGAGCTGAAGAACGGTGTTCGGGGTAAAGAAAACGGAACTGAAGAAGCGGCAGCGCGTGGTTTTATTAAAGGTTACAGAAATTCTGGTAACGGCGAATTTGATTTTAGAGGTTTTTATGATAATGGTGAGAATGTGGATGATGACGACGACGATGATGATGTGAGTTGTTCAAGTTCTGACTTGTTTGAGTTGGATCACCTTATTGGAGCTGCAAGGTACCAAGAAGAGCTTCCTGTGTATGAAACTACCAATTTGGAAACAAATAAAGCTATTGCTAGTGGTCTATGTTTGTAG 1188 0.4268 MHRREREKSMKEGTYPQRRRTPSFSSSLLDAIYRSTDESKTSLHEDQHPGLYDGQTTHTSKHNFNGVYSEKRGGKERMNLRRAVMLEDWMEKHSSHSHGNSQLLNSSSSSSECSSGGIFSSSETDTTTLKKQRARPTSEKKKQDHRISEKQNKPQREGGFERTKLRALKIYGELNQKVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTPSKKSNNGVKRSVRFYPVSVILGEDSEPQSGHKCNNIYESEPNLSVRKITRSSSIKELKNGVRGKENGTEEAAARGFIKGYRNSGNGEFDFRGFYDNGENVDDDDDDDDVSCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0609 395 PANTHER PROTEIN BIG GRAIN 1-LIKE A 1 395 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 226 250 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 1 78 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 96 127 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 91 162 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 1 15 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 128 162 - -
Ssu6g0609 395 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 395 IPR039621 GO:0009734
Ssu6g0609 395 MobiDBLite consensus disorder prediction 52 66 - -
Ssu6g0609 395 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0609 Ssu-Chr6 9604456 9605643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0609 - - gmx:100803228 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0609 6 9604456 9605643 Ssu4g3158 4 80027266 80028084 ECH
Ssu6g0609 6 9604456 9605643 Ssu1g3597 1 91350960 91352138 ECH
Ssu6g0609 6 9604456 9605643 Ssu5g0445 5 9248037 9249140 ECH
Ssu6g0609 6 9604456 9605643 Ssu6g0609 6 9604456 9605643 ECH