Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3158 ATGGACAAGTGGGACAATAAACCATCAAGAAAACAGCACCACAGAGAAAacccttctttctcttccacTCTACTGGACGTTATCTACCGTTCCATCGACGAAGGTCCAACcgaggagaaagaagaagacCAACTCATCTTCTACAGAGAAACCATGAGGAAGCAGAAACAGAGCAATTGCTTCAGAGAAGACTCTGAAGCTGAGAAACACAACTCTCGCAGGGCCAGGAAGGTGGAGAATTGGATGGAGAAGAGAGCCAGCGAGAAAGTTCTAACGGGAAGAAACTCATTGACGGAATTTGAAAGAAGAACACGAAgcaattcaatttcaaacactCTTTCTATGTATTCAAGCTCAACCTCCTCTGAGTCAAGCTCTGTTGGGGGGTTCTCTTCTTCAGAGTCAGAATCCTTCTATGGAGTGCAAAGGCCAAAGCCAATTAAAACCAGTGTTTCTGGTAAAACCAAAACCAACTTTGATGCTGCACTTCACAATCACAACCTCAGGAGTCACTCTTCCCAAACCCAAAAGCCAAAGCATGAGAATGGTTTTGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCAATTTCCCCAGGTGCAAGACTTGCTAGCTTTCTCAATTCTCTTTTCACTTCAAGTGGAAATGCCAAGAAAGCAAAGGTTTCAACAACATCTGCTTGTCGTCCTGTCCTGATCCCAGTTGCAACTGATCTTGCTGCTGATACTAAATCAGCAGCACATCCTGGTTCTACTTGTTCAACCGCATCTTCTTTTCAAGGTCTTGTTTGA 819 0.4078 MDKWDNKPSRKQHHRENPSFSSTLLDVIYRSIDEGPTEEKEEDQLIFYRETMRKQKQSNCFREDSEAEKHNSRRARKVENWMEKRASEKVLTGRNSLTEFERRTRSNSISNTLSMYSSSTSSESSSVGGFSSSESESFYGVQRPKPIKTSVSGKTKTNFDAALHNHNLRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSSGNAKKAKVSTTSACRPVLIPVATDLAADTKSAAHPGSTCSTASSFQGLV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3158 272 MobiDBLite consensus disorder prediction 113 153 - -
Ssu4g3158 272 MobiDBLite consensus disorder prediction 55 76 - -
Ssu4g3158 272 MobiDBLite consensus disorder prediction 256 272 - -
Ssu4g3158 272 PANTHER PROTEIN BIG GRAIN 1-LIKE A 10 268 - -
Ssu4g3158 272 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 268 IPR039621 GO:0009734
Ssu4g3158 272 MobiDBLite consensus disorder prediction 1 17 - -
Ssu4g3158 272 MobiDBLite consensus disorder prediction 113 139 - -
Ssu4g3158 272 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g3158 272 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3158 Ssu-Chr4 80027266 80028084 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3158 - - gmx:100798956 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0609 6 9604456 9605643 Ssu4g3158 4 80027266 80028084 ECH
Ssu4g3158 4 80027266 80028084 Ssu4g3158 4 80027266 80028084 ECH
Ssu4g3158 4 80027266 80028084 Ssu1g3597 1 91350960 91352138 ECH
Ssu4g3158 4 80027266 80028084 Ssu5g0445 5 9248037 9249140 ECH