Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00499 ATGGAGAGCGTGTCATCCCCAATAACAACAACAACTACAAGCAGCACCAGCAGTGGTGGTGGAGGCGGTGGTAGCAGTACTCCGAGTAGGTACGAGAACCAGAAGCGGCGAGACTGGAACACGTTCAGTCAGTACCTGCGGAACCACCGGCCGCCGCTGTCGGCTGCGCTGTGCAGCGGGGCGCACGTGCTGGAGTTCCTGCACTACCTGGACCAATTCGGGAAGACGAAGGTGCATAACCCGACGTGCCCGTTCTTCGGGCTGCCGAACCCTCCGGCACCGTGCCCCTGCCCGCTCCGGCAGGCGTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGGAGAGCCGAAAGCAACCCCTTTGGCACCCGCGTGGTGAGGCTGTACTTGCATGATGTTCGTGACTTTCAGGCGAAGGCGAGAGGAGTTAGCTACGAGAAGAAGAGAAAGAGACCAAAGTCCAACATCTCTAATGCACCTTCTGTTACCACTTCTCCCAATGCCACTGCTACTGCCACTTAG 546 0.6062 MESVSSPITTTTTSSTSSGGGGGGSSTPSRYENQKRRDWNTFSQYLRNHRPPLSAALCSGAHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRAESNPFGTRVVRLYLHDVRDFQAKARGVSYEKKRKRPKSNISNAPSVTTSPNATATAT 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00499 181 PANTHER PROTEIN G1-LIKE2 21 167 IPR040222 -
Spst6g00499 181 ProSiteProfiles ALOG domain profile. 30 157 IPR006936 -
Spst6g00499 181 Pfam ALOG domain 27 143 IPR006936 -
Spst6g00499 181 MobiDBLite consensus disorder prediction 163 181 - -
Spst6g00499 181 MobiDBLite consensus disorder prediction 151 181 - -
Spst6g00499 181 MobiDBLite consensus disorder prediction 1 34 - -
Spst6g00499 181 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00499 Spst-Chr6 4544547 4545092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00499 - - gmx:100803965 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03089 1 39446461 39447381 Spst6g00499 6 4544547 4545092 ECH
Spst10g00353 10 3546357 3546938 Spst6g00499 6 4544547 4545092 ECH
Spst6g00499 6 4544547 4545092 Spst6g00499 6 4544547 4545092 ECH
Spst6g00499 6 4544547 4545092 Spst10g00197 10 1976631 1977934 PCT