Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00353 ATGAATTCCTTTCAAGAATTTGACTCCTCGTCAAACTCGGACACCAAAGCCATCAACCTCGCAGCAGGTAACACCTCCAATTTCTCATCACCAGCACCACCTTCATCCTCATCATCATCGCCTCCTTCTTCCACCACTCTGAGCCGCTACGAGAATCAAAAGCGGCGTGACTGGAACACGTTCGGGCAGTACCTCAGGAACCACAGACCCCCACTTTCGCTCTCACGCTGCAGCGGTGCCCACGTGCTGGAATTCCTGAGGTACCTGGACCAGTTTGGGAAAACCAAGGTTCACACGCACCTTTGTCCCTTCTTCGGGCACCCCAACCCTCCTGCACCTTGTCCTTGCCCTCTACGCCAAGCATGGGGCAGCCTCGATGCTCTCATAGGTCGCCTCAGAGCTGCTTTTGAAGAAAATGGGGGAAAACCTGAAGCTAACCCTTTCGGTGCTCGCGCTGTGAGGCTCTACCTTCGTGAAGTGCGTGATTCACAAGCCAAAGCTAGGGGAATTAGCTATGAGAAAAAGAAACGCAAGCGTCCCCAACACCCTCCTCCATTGCCCCCCTCAAATGATGCAAGTTAG 582 0.5361 MNSFQEFDSSSNSDTKAINLAAGNTSNFSSPAPPSSSSSSPPSSTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQHPPPLPPSNDAS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00353 193 MobiDBLite consensus disorder prediction 1 52 - -
Spst10g00353 193 MobiDBLite consensus disorder prediction 163 193 - -
Spst10g00353 193 Pfam ALOG domain 37 162 IPR006936 -
Spst10g00353 193 PANTHER PROTEIN G1-LIKE2 32 181 IPR040222 -
Spst10g00353 193 MobiDBLite consensus disorder prediction 1 49 - -
Spst10g00353 193 ProSiteProfiles ALOG domain profile. 49 176 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00353 Spst-Chr10 3546357 3546938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00353 - - gmx:100806497 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00353 10 3546357 3546938 Spst10g00353 10 3546357 3546938 ECH
Spst10g00353 10 3546357 3546938 Spst6g00499 6 4544547 4545092 ECH
Spst1g03089 1 39446461 39447381 Spst10g00353 10 3546357 3546938 ECH
Spst10g00353 10 3546357 3546938 Spst1g03089 1 39446461 39447381 ECH