Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03089 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCTGACAACACCTGCAACCTCATCACCAATAGCACCACCACCAACTTAACCACTAGTGTTTCCTCTTCCTCAGCTGCTTCTACCTCCATCACCAGCAGCAGCCGCTACGAGAACCAGAAACGCCGTGACTGGAACACCTTTGGCCAATACCTCAAGAATCACCGACCCCCTCTCTCCCTTTCAAGGTGCAGCGGTGCACATGTCCTTGAATTCCTGAGGTACCTGGATCAATTTGGGAAGACCAAAGTGCACACACCGATCTGTCCCTTTTATGGACACCCAAACCCTCCAGCACCTTGTCCATGTCCTCTAAGACAAGCTTGGGGGAGTCTTGACGCTCTGATAGGGCGTTTGCGTGCAGCTTTTGAGGAAAATGGAGGAAAGCCTGAGGCAAACCCTTTTGGAGCTCGAGCTGTGAGACTCTACCTTCGCGAGGTTCGTGATCTGCAGTCCAAAGCAAGAGGAATCAGCTACGAGAAGAAGAAAAGGAAGCGTCCACCACCTCAGCAACAAGCCTTGCCTCTACCTGCTCTTCCTCCTCCAGGTGCAAGTGCAACTCATTAG 603 0.5058 MDSNIQDFIDTCNSDNTCNLITNSTTTNLTTSVSSSSAASTSITSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQALPLPALPPPGASATH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03089 200 ProSiteProfiles ALOG domain profile. 48 175 IPR006936 -
Spst1g03089 200 PANTHER PROTEIN G1-LIKE2 29 182 IPR040222 -
Spst1g03089 200 MobiDBLite consensus disorder prediction 166 200 - -
Spst1g03089 200 Pfam ALOG domain 42 161 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03089 Spst-Chr1 39446461 39447381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03089 - - gmx:100527164 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03089 1 39446461 39447381 Spst1g03089 1 39446461 39447381 ECH
Spst1g03089 1 39446461 39447381 Spst6g00499 6 4544547 4545092 ECH
Spst1g03089 1 39446461 39447381 Spst10g00353 10 3546357 3546938 ECH
Spst10g00353 10 3546357 3546938 Spst1g03089 1 39446461 39447381 ECH
Spst1g03089 1 39446461 39447381 Spst7g00084 7 660474 661070 PCT
Spst10g00197 10 1976631 1977934 Spst1g03089 1 39446461 39447381 PCT