Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00197 ATGATAGGAAAGGGGGTAAAAGATGTAAATGACGCGCTTAAAAGTAGACAAGATCTAAAGCAGATCCAAGGGTTTGAACAAGAAAAATCGGGGAGGGTATATCAGATCAGATCCATGGATTTGGTTTCGGAACCAACAAACGTTGCAAGCCCCAGGTACAAGATTGAGACGCCGACCACGAATCCAACCACTGGAAACGCGGCTGTCTCGTCTCCTTCTTCGGGAAGCAACAGTGGGAGCACTACTCCCAGCCGTTACGAGAACCAAAAGCGGCGAGACTGGAACACTTTCTGCCAGTACCTAAGGAACCACCGTCCACCACTCTCGTTGGCCCTGTGCAGCGGCGCCCACGTCCTCGAATTCCTCCACTACCTCGACCAGTTCGGGAAGACCAAGGTTCACAACCACCCTTGCCCGTTCTTTGGTCTCCCCAACCCTCCCGCGCCGTGTCCCTGCCCGCTCCGCCAGGCGTGGGGTAGTCTAGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAAAACGGAGGCCGCCCGGAGACCAACCCATTCGGTGCACGCGCCGTCAGGATTTACCTGCGCGATGTTCGTGATTTTCAGGCCAAGGCGAGAGGTGTTAGCTACGAGAAGAAAAGAAAGAGGCCCAAGCCCAAGGTCAGTCCTGCTCTTACTTAG 675 0.56 MIGKGVKDVNDALKSRQDLKQIQGFEQEKSGRVYQIRSMDLVSEPTNVASPRYKIETPTTNPTTGNAAVSSPSSGSNSGSTTPSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQAKARGVSYEKKRKRPKPKVSPALT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00197 224 MobiDBLite consensus disorder prediction 204 224 - -
Spst10g00197 224 MobiDBLite consensus disorder prediction 45 85 - -
Spst10g00197 224 PANTHER PROTEIN G1-LIKE2 70 215 IPR040222 -
Spst10g00197 224 MobiDBLite consensus disorder prediction 45 88 - -
Spst10g00197 224 Pfam ALOG domain 81 198 IPR006936 -
Spst10g00197 224 ProSiteProfiles ALOG domain profile. 85 212 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00197 Spst-Chr10 1976631 1977934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00197 - - gmx:102663941 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00499 6 4544547 4545092 Spst10g00197 10 1976631 1977934 PCT
Spst10g00197 10 1976631 1977934 Spst1g03089 1 39446461 39447381 PCT