Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04942 ATGGTGATGATTACTGCTTGGATCACTGACCTTTTCGCTTGTATGGGTGGTTGTTTTGGGTGTTGTATGAAACCCACACCAATAATTGCTGTGGATGAACCGACAAAGGGACTAAGAATTCAGGGGCAGACAGTGAGAAAACCACACATATCAGATGGTTTCTGGAGTTCAAGCACTTGTGATCTGGATAATGGCAACATTCAATCTCAGAGAAGTATCTCGTCTGTCAGTACATTAAATCAAATTCTCTATCATAGTGGTGGAACTTCTACTACAGGCACCAATTCTGAATTTGTAAACCCAGGCCTTCTTCTCTGGAATGAAAGTAGGCTCCAGTGGGTTGGAAGTGAAAAATCTAGCAAGCCTAGCCAACAAAAACAAGAACCAAGACTGAATTGGAATGCTACTTATGAAAGTTTGCTTGGGACTAGACAACCTTTCCCCAAGTCCATACCTTTATCTGAAATGGTCGAATTCCTGGTGGATGTTTGGGAGCGTGAAGGGATGTATGGTTGA 516 0.4244 MVMITAWITDLFACMGGCFGCCMKPTPIIAVDEPTKGLRIQGQTVRKPHISDGFWSSSTCDLDNGNIQSQRSISSVSTLNQILYHSGGTSTTGTNSEFVNPGLLLWNESRLQWVGSEKSSKPSQQKQEPRLNWNATYESLLGTRQPFPKSIPLSEMVEFLVDVWEREGMYG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04942 171 PANTHER OS07G0479600 PROTEIN 4 170 - -
Spst3g04942 171 Pfam Protein of unknown function (DUF4050) 131 170 IPR025124 -
Spst3g04942 171 Pfam Protein of unknown function (DUF4050) 58 129 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04942 Spst-Chr3 101107624 101110769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04942 - - gmx:100813288 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04942 3 101107624 101110769 Spst4g02415 4 64581063 64583325 ECH
Spst3g04942 3 101107624 101110769 Spst5g00091 5 948503 952784 ECH
Spst3g04942 3 101107624 101110769 Spst8g01548 8 16799591 16802292 ECH
Spst3g04942 3 101107624 101110769 Spst3g04942 3 101107624 101110769 ECH