Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00091 ATGTTTTTAAAATTGAATCCATTGTTAACAGACAAGAAGAAACGCAACAGAACCCAAAAACGACTCCCTCGCAGAAGGGAACCAAACCATTTGAGGACTGTCTGCAAGCGCAGTGGTTGTCTTGGGCCCTTTAAAAAGACCCCTCTAATTGCTAATGCTGATGTTCCGCCAAAAGGATTGAAGAAGCGAGGTAAGGCTGCAAAGAAACCTAGTACATCAGAGGATTTCTGGATCACCAGCACGCATGATATGGACAACAGTGCTGTTCAGTCACAGGGAAGCATCTCATCAGCCAGTATAACCAATCAGGCTGCAGATCCTCATGGAGGTTCAGGCAACCCCACTGAATTTGTGAATCATGGTCTTATTCTTTGGAATCAGACTCGTAAAGATTGGGTAGGAAATAAAAGGTCTGAGAACAGAACAGAACAGTTGAGAGAACCAAAAGTGAGTTGGAATGCAACATATGAAAGTTTACTGGGTAGCAACAAGCCATTCCCTCAGCATATTCCCCTTGCGGAAATGGTAGATTTCCTTGTGGACATCTGGGAACAAGAGGGTCTGATTGACTAA 573 0.4398 MFLKLNPLLTDKKKRNRTQKRLPRRREPNHLRTVCKRSGCLGPFKKTPLIANADVPPKGLKKRGKAAKKPSTSEDFWITSTHDMDNSAVQSQGSISSASITNQAADPHGGSGNPTEFVNHGLILWNQTRKDWVGNKRSENRTEQLREPKVSWNATYESLLGSNKPFPQHIPLAEMVDFLVDIWEQEGLID 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00091 190 Pfam Protein of unknown function (DUF4050) 149 188 IPR025124 -
Spst5g00091 190 Pfam Protein of unknown function (DUF4050) 80 148 IPR025124 -
Spst5g00091 190 PANTHER OS07G0479600 PROTEIN 33 190 - -
Spst5g00091 190 MobiDBLite consensus disorder prediction 87 118 - -
Spst5g00091 190 MobiDBLite consensus disorder prediction 52 73 - -
Spst5g00091 190 MobiDBLite consensus disorder prediction 1 30 - -
Spst5g00091 190 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00091 Spst-Chr5 948503 952784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00091 - - pvu:PHAVU_005G177600g 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02415 4 64581063 64583325 Spst5g00091 5 948503 952784 ECH
Spst3g04942 3 101107624 101110769 Spst5g00091 5 948503 952784 ECH
Spst5g00091 5 948503 952784 Spst5g00091 5 948503 952784 ECH
Spst5g00091 5 948503 952784 Spst4g02415 4 64581063 64583325 PCT