Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01548 ATGAAAGATCCACAGGCACAAGTTGTCTTGATTAAGAAAATAGGTTGTCTTGGATGCTGCAACCCAGGGATTAATTCAATGGATGAAGCTTCTCAAGGACTGAGAACTCAAGACCAAACAGTGACTAAAGTGGATGGATCAGAAGATTTCTGGAGCAGCAGCACCTTTGAATTAGACCACAGCGCAGCTAACTCACATAGAAGCATCTCATCAATCGGAATATCGAATAATCCTTCAGATCCTCAAAGTAGTGGAGGCGGTCAAAGTGATCCTCCTGAATTTATCAACCATGGCAAGTTTGCTGTTATATTGGTTCTCTACTATGGAAACAGGCTTTTTCTCTGGAACCAGATAAGACAACAATGGCTTGGAAACAAAAGGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCCACCTACGACACCCTACTTGGAAACAACAAGCCCTTTCCCCAACGCATCCCTTTGAGAGAAATGATTGACTTTCTTGTTGATGTTTGGGAGCAAGAGGGTCTCTACGACTGA 540 0.4241 MKDPQAQVVLIKKIGCLGCCNPGINSMDEASQGLRTQDQTVTKVDGSEDFWSSSTFELDHSAANSHRSISSIGISNNPSDPQSSGGGQSDPPEFINHGKFAVILVLYYGNRLFLWNQIRQQWLGNKRSESITEIQEPRISSNATYDTLLGNNKPFPQRIPLREMIDFLVDVWEQEGLYD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01548 179 MobiDBLite consensus disorder prediction 67 91 - -
Spst8g01548 179 MobiDBLite consensus disorder prediction 67 90 - -
Spst8g01548 179 PANTHER OS07G0479600 PROTEIN 10 179 - -
Spst8g01548 179 Pfam Protein of unknown function (DUF4050) 139 179 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01548 Spst-Chr8 16799591 16802292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01548 - - gmx:100793281 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01548 8 16799591 16802292 Spst8g01548 8 16799591 16802292 ECH
Spst3g04942 3 101107624 101110769 Spst8g01548 8 16799591 16802292 ECH