Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02415 ATGCATATGGGGTTTTTTTTCCCTATATTGAATGATAATCATGTCATGGATTTCAATGCCAGCATTTCTGTTTTGGGAGTAGAGCATAGCAGTGGTTGTGTTGGATGCTATAAAAGGCCTACACTGAGTACTACAGTGGATGTGCCATCAAAAGGAGTGGCCAAAAAAGGTAACTCGGTGAAGAAACTTAGTTCATCCGAGGATTTCTGGACCACCAGCACGCATGATATGGACAACAGTGCCGTCCAGTCACAGGGAAGCATTTCTTCAGCCAGCCTAACAAACCAAACTGTGGTTCCTCATGCTAGTTCTTCCAAAAACAGCAGCAACCCCACTGAATTTGTAAATCATGGTCTAATTCTTTGGAATCAGACTCGGCAACGCTGGGTTGGAAATAAAAAGTCTGAAAATCGAACACAGCAATTACAAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTTGGCAGCAACAAGCCTTTCCGTCAGCCTATCCCTCTTACTGAAATGGTAGATTTTCTTGTGGACATCTGGGAGCAGGATGGCCTATACGACTGA 564 0.4291 MHMGFFFPILNDNHVMDFNASISVLGVEHSSGCVGCYKRPTLSTTVDVPSKGVAKKGNSVKKLSSSEDFWTTSTHDMDNSAVQSQGSISSASLTNQTVVPHASSSKNSSNPTEFVNHGLILWNQTRQRWVGNKKSENRTQQLQEPKLSWNATYESLLGSNKPFRQPIPLTEMVDFLVDIWEQDGLYD 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02415 187 Pfam Protein of unknown function (DUF4050) 146 187 IPR025124 -
Spst4g02415 187 Pfam Protein of unknown function (DUF4050) 73 145 IPR025124 -
Spst4g02415 187 PANTHER OS07G0479600 PROTEIN 29 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02415 Spst-Chr4 64581063 64583325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02415 - - gmx:547651 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02415 4 64581063 64583325 Spst5g00091 5 948503 952784 ECH
Spst3g04942 3 101107624 101110769 Spst4g02415 4 64581063 64583325 ECH
Spst4g02415 4 64581063 64583325 Spst4g02415 4 64581063 64583325 ECH
Spst5g00091 5 948503 952784 Spst4g02415 4 64581063 64583325 PCT