Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05619 ATGGATTCAATTCAAGAATTTATGGAGTCATGTAACTCTGAGAACCTCACCAACAGCTCCACCATCACCAACAGTACCAGCTTAGTTGGTAGCTCTTCCCCTTCTGGTTCCACCACCACCAGCAGCCGCTATGAGAACCAAAAACGCCGTGACTGGAACACCTTTGGGCAATACCTCAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGCAGTGGTGCACATGTTCTTGAATTTCTAAGGTACTTGGACCAATTTGGGAAGACAAAGGTTCACACTCCGATCTGTCCTTTCTATGGACATCCAAACCCTCCAGCACCATGTCCATGTCCTCTAAGACAAGCTTGGGGAAGCCTTGATGCTCTTATAGGGCGTTTAAGGGCAGCTTTTGAGGAAAATGGAGGGAAGCCTGAGACTAATCCATTTGGAGCAAGAGCTGTGAGGCTTTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCAAGAGGAATCAGTTATGAGAAGAAGAAGCGGAAGCGTCCACCACCACAGCAGCAGCAACAACAACAACAACCATCAATGGCACTTCCACCACCACCACTTCATCATCATCACCATCACCACCATCATCATCATCAGCTCCCACCTCCAGGTGCAACTCAATAA 645 0.4868 MDSIQEFMESCNSENLTNSSTITNSTSLVGSSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQQQQQQPSMALPPPPLHHHHHHHHHHHQLPPPGATQ. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05619 214 ProSiteProfiles ALOG domain profile. 43 170 IPR006936 -
Seca8g05619 214 MobiDBLite consensus disorder prediction 15 47 - -
Seca8g05619 214 MobiDBLite consensus disorder prediction 15 43 - -
Seca8g05619 214 MobiDBLite consensus disorder prediction 193 207 - -
Seca8g05619 214 Pfam ALOG domain 37 156 IPR006936 -
Seca8g05619 214 MobiDBLite consensus disorder prediction 161 214 - -
Seca8g05619 214 PANTHER PROTEIN G1-LIKE2 18 193 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05619 Seca-Chr8 147801425 147802609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05619 - - gmx:100803605 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05619 8 147801425 147802609 Seca8g05619 8 147801425 147802609 ECH
Seca8g05619 8 147801425 147802609 Seca8g04284 8 122405793 122406401 ECH
Seca8g05619 8 147801425 147802609 Seca8g05973 8 153136671 153138310 ECH
Seca8g05973 8 153136671 153138310 Seca8g05619 8 147801425 147802609 ECH
Seca8g05619 8 147801425 147802609 Seca8g04284 8 122405793 122406401 PCT
Seca2g04387 2 128942256 128942942 Seca8g05619 8 147801425 147802609 PCT