Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04387 ATGGATTCAATCCAAGAATTTATAGACACATGTAACTCTGACAACAACAACAAGACCATCATCACCACCACCACCACCACCACAACCACCTTAGCTACTGCTACAGCCACCTCTTCCACCACCACCAGCAGCCGCTATGAGAACCAGAAACGCCGTGACTGGAATACCTTTGGTCAATACCTCAAGAATCACAGACCCCCTCTTTCTCTCTCTAGATGCAGTGGTGCACATGTCCTTGAATTTCTCAGTACTCACCATGCACCTCTCTCTCTTTATCTTATTAGGTACTTGGATCAATTTGGGAAGACCAAAGTGCACACACCAATTTGTCCTTTTTATGGACACCCTAACCCTCCAGCTCCATGTCCATGTCCTCTAAGACAAGCATGGGGAAGCCTTGATGCTCTCATAGGTCGTCTTCGTGCAGCTTTTGAGGAAAATGGAGGGAAACCAGAAGCTAATCCATTTGGAGCTAGAGCTGTGAGGCTTTACCTTCGTGAGGTTCGTGATCTTCAATCAAAAGCAAGAGGAATTAGTTATGAAAAAAAGAAGAGGAAGCGTCCACCACAACAACAATCTTTGCCTCTACCACCTTCAGGTGCAACTCATTAG 612 0.4575 MDSIQEFIDTCNSDNNNKTIITTTTTTTTTLATATATSSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLSTHHAPLSLYLIRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQSLPLPPSGATH. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04387 203 MobiDBLite consensus disorder prediction 175 203 - -
Seca2g04387 203 Pfam ALOG domain 37 170 IPR006936 -
Seca2g04387 203 PANTHER PROTEIN G1-LIKE2 25 192 IPR040222 -
Seca2g04387 203 ProSiteProfiles ALOG domain profile. 45 184 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04387 Seca-Chr2 128942256 128942942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04387 - - ccaj:109797167 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04284 8 122405793 122406401 Seca2g04387 2 128942256 128942942 PCT
Seca2g04387 2 128942256 128942942 Seca8g05619 8 147801425 147802609 PCT