Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04284 ATGAATTCTCTTCAAGAATTTGAACCCTCATCAAGCAAAGACAACAAAGGCATCATAAACATAGCAGGGAACAGCTCCAATTTAACAACAACAACAGCCATGATGACCATGTCCTCACCATCATCAACATCATCAACATCACCACCATCAACTTCTCCAAGTAGGTATGAGAATCAAAAGAGGAGGGACTGGAACACTTTTGGGCAGTACCTAAGGAACCACAGACCTCCACTTTCCCTCTCTCGCTGCAGTGGGGCTCATGTCCTTGAGTTCCTAAGGTATCTCGATCAGTTTGGGAAAACAAAGGTTCACACACAGCTTTGTCCTTTCTTTGGACACCCAAACCCACCTGCACCATGTCCATGTCCCCTGCGTCAAGCATGGGGGAGCCTTGATGCACTCATAGGTAGACTCAGAGCTGCTTTTGAAGAGAATGGAGGGAAACCAGAGGCTAACCCTTTTGGTGCTCGTGCTGTTAGGCTCTATCTTCGTGAAGTGCGTGATTCACAAGCCAAAGCTAGAGGAATCAGCTATGAAAAGAAGAAGCGCAAGCGTCCCCCTCATCCTCTCCCACCACCACCTGCATTGCCACCAACAACTCATGAATAG 609 0.4762 MNSLQEFEPSSSKDNKGIINIAGNSSNLTTTTAMMTMSSPSSTSSTSPPSTSPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPHPLPPPPALPPTTHE. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04284 202 MobiDBLite consensus disorder prediction 169 202 - -
Seca8g04284 202 MobiDBLite consensus disorder prediction 1 61 - -
Seca8g04284 202 ProSiteProfiles ALOG domain profile. 55 182 IPR006936 -
Seca8g04284 202 PANTHER PROTEIN G1-LIKE2 35 186 IPR040222 -
Seca8g04284 202 MobiDBLite consensus disorder prediction 1 55 - -
Seca8g04284 202 Pfam ALOG domain 45 168 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04284 Seca-Chr8 122405793 122406401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04284 - - mof:131152258 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05619 8 147801425 147802609 Seca8g04284 8 122405793 122406401 ECH
Seca8g05973 8 153136671 153138310 Seca8g04284 8 122405793 122406401 ECH
Seca8g04284 8 122405793 122406401 Seca8g04284 8 122405793 122406401 ECH
Seca8g05619 8 147801425 147802609 Seca8g04284 8 122405793 122406401 PCT
Seca8g04284 8 122405793 122406401 Seca2g04387 2 128942256 128942942 PCT