Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05973 ATGAGTTCCTTTCAAGAATTTGAGACCTCATCAAACACTACAGATGACAACAAAGGCATCATCAATTTCACACCTGCAATGAACAGTAACAATTTCACATCTTCATCATCCTCTTCACCACAACCACCAACTCTGAGTCGGTATGAGAATCAAAAGCGGAGGGATTGGAACACGTTTGGGCAGTACCTAAGAAACCACAGACCACCACTGTCTCTGTCTCGCTGCAGTGGAGCTCATGTGCTTGAATTCCTAAGGTACCTTGACCAGTTTGGGAAAACTAAGGTTCACATACAGCTTTGTCCCTTCTTTGGACACCCAAACCCACCTGCACCATGTCCTTGTCCTCTACGCCAAGCTTGGGGAAGCCTTGATGCTCTCATAGGTCGACTTAGAGCTGCTTTTGAAGAGAATGGAGGGAAACCAGAAGCTAACCCTTTTGGTGCTCGTGCTGTTAGGCTTTACCTTCGTGAAGTGCGTGATTCACAAGCCAAAGCTAGAGGAGTTAGTTACGACAAAAAGAAGCGAAAGCGCCCCCAACAATCACAACAACCTCAACCTCCAAATGCAACTTAA 573 0.4607 MSSFQEFETSSNTTDDNKGIINFTPAMNSNNFTSSSSSSPQPPTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHIQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGVSYDKKKRKRPQQSQQPQPPNAT. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05973 190 MobiDBLite consensus disorder prediction 161 178 - -
Seca8g05973 190 MobiDBLite consensus disorder prediction 1 47 - -
Seca8g05973 190 MobiDBLite consensus disorder prediction 161 190 - -
Seca8g05973 190 PANTHER PROTEIN G1-LIKE2 31 183 IPR040222 -
Seca8g05973 190 Pfam ALOG domain 36 160 IPR006936 -
Seca8g05973 190 ProSiteProfiles ALOG domain profile. 47 174 IPR006936 -
Seca8g05973 190 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05973 Seca-Chr8 153136671 153138310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05973 - - gmx:100789834 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05973 8 153136671 153138310 Seca8g05973 8 153136671 153138310 ECH
Seca8g05973 8 153136671 153138310 Seca8g04284 8 122405793 122406401 ECH
Seca8g05619 8 147801425 147802609 Seca8g05973 8 153136671 153138310 ECH
Seca8g05973 8 153136671 153138310 Seca8g05619 8 147801425 147802609 ECH