Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01283 ATGCCGACGCCGGTAAGCGCAGCGAGGCAATGCTTAACTGATGAGGCTGCGCGTGCGCTGGATGACGCGGTGGCGGTGGCGAGTCGCCGGAGTCACGCGCAAACGACATCGCTCCATGTCGTTTCAGCGCTGCTGGCGATGCCGGCCTCCGCCCTAAGAGATGCCTGCGGTCGAGCTCGTGGTGGCGGAAGATTCTCGTCGTCGTCGTCTTCATACTCGCCGCGGCTTCAATTCCGAGCACTGGAGCTGTCGGTGGGAGTCTCACTGGACCGGTTGCCGTCGGCGAAGGGCACGGCGGCGGCGCAGGAGGATCCTCCGGTGTCGAATTCCCTCATGGCAGCAATCAAACGCTCTCAGGCGAACCAACGGCGCCACCCTGAAAGCTTCCACTTGTTTCACCAGAGTCAGGGAACGACGTCGTTGTTGAAGGTGGAGCTCAAGCACTTCGTTTTGTCAATTCTCGATGACCCGATTGTGAGTCGGGTCTTCGCCGAAGCAGGTTTTCGGAGCTGCGACGTGAAGCTCGCGTTGCTTCAACCCCCTTCACAACCCTCTTCTAGATTCTTCCCCTCTCGAACCCTGTCCCCGCCCGTTTTCCTCTGTAATCTTGAACCGGGTCGACCCGTACCCGCTTTCGGTGTGGACGAGAACTGTAGAAGGATCGCGGAGGTTCTAACGCGGAAGAACAAGAGGAACCCTTTGTTGATGGGTGTTTACGCCAAGGGTGCTCTTGGTAATTTCACTGAGTTGGTTCAAAAGGGTAGAGGGGGTGCTTTGTTCCCTGTAACAATGGCTGGTTTGAGGGTTATCTGTATTGGGAAGGAAATTTCTGAGTTTGTGAGCCAAAACGACGCCGTGGAAGAGAAGATGGGTATGAGGTTCCATGAGTTGGGTCGTGAGGTGGAGAATTGTTCGGGTCCTGGTGTTGCTGTTAACTTCGGGGAGATTGAGGTTTTGGTTGGGGATTCGGTGAATGTTGGTGCTGTAAGGTTTGTTGTGTCGCAGTTGACGAGGTTGTTGGAGATTCATGGTGGGAAGGTTTGGTTGATGGGAGTTGCTGAAACCTCTGATGCTTATTCTAAGTTCTTGGCTTTGCTCCCGAATGTGGAAAACGATTGGGATCTGCATCTTCTGACTGTGACATCTGCCACTCCTTCAATGGAAGGACTCTACTCTAAATCCAGCTTGATGGGGTCCTTTGTTCCATTTGGTGGATTCTTTTCCACACCTTCTGAAATAAAAAATCCTGTAAGCTGTACAAATGCATCTTTTACTCGTTGTGACCAATGCAATGAAAAATATGAACAAGAAGTTGCTGATACTCTAAAGATTGATCCTGCTACTCTGGCATCTAGTCACTCGACAAGCTTGCCTTGGTTACAAAAGGTTGTTCATGTGGACACACATGGAGGAGGATTGGATTTGGCAAAGACTAATGAAGGAAACACAAGTTTGAATGAGAAGATCTTGAGATTTCAAAAGAAATGGAATGATATCTGTCAATGTCTTCATCACCCCAGATCACTTCCTGAATTTAATATTTCTCAAACAAGGTCTCAAGCTCCATCACTCGACGTTTTAAGGTTTGGTTCAGGTTCTAAGGAAAGCAGCAGTAAAGATCCATCACTTAATGAACTCCAATATTCTAGTCCAATTTCCTACATGCCTAAAGAGTTGCATGGTATTTTTCCTTCGAAACAGTTATCACTTGTTCCAGTACCTTCTGATACAGTCAGTGTCAATATTAGAACTGATCATGTACCAAAAGTTTCAGAAACTTGGAAAATTGATGTGCAGACCCCTTGGGTTGCCCCTTCACCTATGGCCAATATGAGTGTGCTTGACCCCAGATCATCTCCATCTCTTACACCAGTGGCCACAGATTTGGGATTGGGGACGTTATATACATCAACTGCTCAGGGGCTAGACACCCCAAAATCACATGATCAAATAAAGCATCTTCAGCACTTGTCAGACTCCGTTTCAGCTGGTTGTGATGCTATGAATGAAAATACTTCACACCAAATTGCTAGACCTTCCAGCTGTGGTCCAAATTTGGAAGGAAAACTTGATTCAGTAGATTTCAAGTCTCTTAATCAATGTCTCACTGAGAAGGTTGGCTGGCAGGACCAGGCCATATGTGCTATCAATCAAACCTTGGTCCTTTGTAAATCTGGTGCAGGAAAGCGTAGAGGCTCACATGGAAGAGCAGACATATGGTTAGCTTTCCTTGGACCAGATAGACTTGGAAAAAGGAAAATTGCTTCAGCTCTTGCAGAGACTATATTTGGAAATACAGAAGGCCTAATCTCTGTAGATCTTTGCTTCCAGGACAGGCTTTATCCATTGAACTTGATTTTTGAATGCCAAAAATCATTTTGTTATGATGTGCTTAGGAGGAAGACAGTTGTGGACTATGTTGCCGGGGAGTTGAGTCGAAAACCTCATTCTGTTGTCTTTCTTGAAAATGTAGATAAAGCTGATTTTCTGGTTCAGACTAGTTTGTTGCAGGCAATAAGAACAGGTAAATTTCCAGACTCGCATGGAAGGGAAATAAGCATCAATAACGCAATCTTTCTTGTATCCTCAACTGTCTGTAAAGGTAATAACTCTTTTTTGGAGGAGTCTAAAGTATATTCTGAGGAAAGAATCCTTGAAGCCAAAAGATGTCAAATGCAATTAATACTTGGAGATCCGTCTGAGGATGCCAAAAGAAGCAGCAGCACAAATGTCAAGATTGTGCCAAGAAAAGGGTCTTCCAAACCTTCACTTCTGAGTAAAAGAAAACAGGCCGATAGTATTGACTCCAGAGAGGGAGCAACAACAAGCAAGATGCAAAAACAGGTCAGCGAAACATCAAGATCCTATCTGGATCTAAATATGCCTCTAAAGGAGATTGAAGAGGGGATCAATGACAATGACCATGAAAGTGAATCTGTAGAGGAAAACAAAGACGCGTGGTTAAATGATTTATGTGATCAAGTTGATGAAAAAGTGGTTTTTAAGCCCTTCAATTTTGATGTGCTTGCTGAACAAATATTAAAAGGCATTAGCATACAATTCCAAAGGACATTTGGTTCAGAATTTCAGCTGGAAATTGATTATGAGGTAATGACACAGATACTTGCAGCTGCTTGGTTAGCAGACAAGAAAAATGGAGTGGAGGATTGGGTTGAACGTGTTCTTAGCAAGAGCTTTGTTGAAGCTCGGCAGAAATATCACCCTGCAGGTCACTGTGTTGTGAAACTTGTTAACTGTGAATCCATTTTTGTGGAAGACTATGCTCCTGGAGTTTGTCTTCCAGCTAGAATTAACCTGAACTAA 3324 0.4528 MPTPVSAARQCLTDEAARALDDAVAVASRRSHAQTTSLHVVSALLAMPASALRDACGRARGGGRFSSSSSSYSPRLQFRALELSVGVSLDRLPSAKGTAAAQEDPPVSNSLMAAIKRSQANQRRHPESFHLFHQSQGTTSLLKVELKHFVLSILDDPIVSRVFAEAGFRSCDVKLALLQPPSQPSSRFFPSRTLSPPVFLCNLEPGRPVPAFGVDENCRRIAEVLTRKNKRNPLLMGVYAKGALGNFTELVQKGRGGALFPVTMAGLRVICIGKEISEFVSQNDAVEEKMGMRFHELGREVENCSGPGVAVNFGEIEVLVGDSVNVGAVRFVVSQLTRLLEIHGGKVWLMGVAETSDAYSKFLALLPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPSEIKNPVSCTNASFTRCDQCNEKYEQEVADTLKIDPATLASSHSTSLPWLQKVVHVDTHGGGLDLAKTNEGNTSLNEKILRFQKKWNDICQCLHHPRSLPEFNISQTRSQAPSLDVLRFGSGSKESSSKDPSLNELQYSSPISYMPKELHGIFPSKQLSLVPVPSDTVSVNIRTDHVPKVSETWKIDVQTPWVAPSPMANMSVLDPRSSPSLTPVATDLGLGTLYTSTAQGLDTPKSHDQIKHLQHLSDSVSAGCDAMNENTSHQIARPSSCGPNLEGKLDSVDFKSLNQCLTEKVGWQDQAICAINQTLVLCKSGAGKRRGSHGRADIWLAFLGPDRLGKRKIASALAETIFGNTEGLISVDLCFQDRLYPLNLIFECQKSFCYDVLRRKTVVDYVAGELSRKPHSVVFLENVDKADFLVQTSLLQAIRTGKFPDSHGREISINNAIFLVSSTVCKGNNSFLEESKVYSEERILEAKRCQMQLILGDPSEDAKRSSSTNVKIVPRKGSSKPSLLSKRKQADSIDSREGATTSKMQKQVSETSRSYLDLNMPLKEIEEGINDNDHESESVEENKDAWLNDLCDQVDEKVVFKPFNFDVLAEQILKGISIQFQRTFGSEFQLEIDYEVMTQILAAAWLADKKNGVEDWVERVLSKSFVEARQKYHPAGHCVVKLVNCESIFVEDYAPGVCLPARINLN* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01283 1107 MobiDBLite consensus disorder prediction 899 953 - -
Rops9g01283 1107 MobiDBLite consensus disorder prediction 902 916 - -
Rops9g01283 1107 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1078 - -
Rops9g01283 1107 Gene3D - 682 913 IPR027417 -
Rops9g01283 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 691 865 IPR027417 -
Rops9g01283 1107 Gene3D - 10 180 IPR036628 -
Rops9g01283 1107 MobiDBLite consensus disorder prediction 936 953 - -
Rops9g01283 1107 ProSiteProfiles Clp repeat (R) domain profile. 8 183 IPR004176 -
Rops9g01283 1107 CDD RecA-like_ClpB_Hsp104-like 694 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01283 Rops-Chr9 21346623 21352266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01283 - - gmx:100804458 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01283 9 21346623 21352266 Rops9g01283 9 21346623 21352266 ECH
Rops9g01283 9 21346623 21352266 Rops11g03951 11 73681598 73686562 ECH
Rops11g02414 11 41023719 41029901 Rops9g01283 9 21346623 21352266 ECH
Rops11g03951 11 73681598 73686562 Rops9g01283 9 21346623 21352266 ECH
Rops6g00808 6 20740466 20744570 Rops9g01283 9 21346623 21352266 ECH
Rops11g02414 11 41023719 41029901 Rops9g01283 9 21346623 21352266 PCT